Mycobacterium simiae: MSIM_34690
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Entry
MSIM_34690 CDS
T07396
Symbol
uvrD1
Name
(GenBank) ATP-dependent DNA helicase UvrD1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
msim
Mycobacterium simiae
Pathway
msim03420
Nucleotide excision repair
msim03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
msim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MSIM_34690 (uvrD1)
03430 Mismatch repair
MSIM_34690 (uvrD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msim03400
]
MSIM_34690 (uvrD1)
Enzymes [BR:
msim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MSIM_34690 (uvrD1)
DNA repair and recombination proteins [BR:
msim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MSIM_34690 (uvrD1)
MMR (mismatch excision repair)
Other MMR factors
MSIM_34690 (uvrD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
BBX42018
LinkDB
All DBs
Position
3654753..3657017
Genome browser
AA seq
754 aa
AA seq
DB search
MLIVAGAGSGKTAVLTRRVGYLIAARGVGVGQILAITFTNKAAAEMRERVVRLVGNRARA
MWVSTFHSTCVRILRNQASLIDGLNSNFSIYDADDSRRLLQMIGRDMGLDIKRYSPRLLS
VAISNLKNELIDPDRAVSNLTDDSDDLARTVASVYAEYQRRLRAANALDFDDLIGETVAV
LQTFPQIAQYYRRRFRHVLVDEYQDTNHAQYVLVRELVGRTDSRSTDSRADAPDHAPDHE
VPPAELCVVGDADQSIYAFRGATIRNIEEFERDYPDATTILLEQNYRSTQNILSAANSVI
ARNSGRREKRLWTDAGEGELIVGYVADNEHDEARFVAEEIDALAERGEITYNDVAVFYRT
NNSSRALEEVFIRAGIPYKVVGGVRFYERKEIRDIVAYLRVLDNPGDAVSMRRILNTPRR
GIGDRAEACVAVYAENTGASFADALVAAAEGKVPMLNSRAVKAISGFVELLDELRGRLDD
DLGDLVESVLERTGYRRELESSTDPQELARLDNLNELVSVAHEFSIDQANNAALDESGQA
PEDEDVPETGVLAAFLERVSLVADTDEIPEHGAGVVTLMTLHTAKGLEFPVVFVTGWEDG
MFPHMRALDDPTELCEERRLAYVGITRARQRLYVSRAIVRSSWGQPMLNPESRFLQEIPQ
ELIEWRRTAPTPSYSAPVSGAGRFGTPRVAPTRSGASKRPLLVLAPGDRVTHDKYGLGRV
EEVSGVGESAMSLIDFGSSGRVKLMHNHAPLSKL
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
ttgctgatcgtggcgggtgcgggctccgggaagacagcggtgttgactcgtcgcgtcggc
tacttgatcgccgcgcgtggggtcggcgtgggtcagatcctggccatcaccttcaccaac
aaggccgccgccgagatgcgggaacgcgtggtcagactggtcggtaaccgcgctcgcgcg
atgtgggtgtcgacgttccactcgacgtgtgtgcggatcctgcgcaaccaggcctcgctg
atcgacgggctcaattccaacttctccatctacgacgccgacgactcgcggcggttgctg
cagatgatcggccgggacatgggtctggacatcaagcggtactcgccgcgcctgctgtcg
gtcgcgatctccaacctcaaaaacgagttgatcgatccggaccgggccgtgtccaatctc
acagatgattctgacgacttggcccgcacggtcgcctcggtatacgccgaataccagcgg
cgcctgcgggcggccaacgcgctcgacttcgacgacctgatcggtgaaaccgtcgcggtg
ttgcagacgttcccgcagatcgcccagtactaccggcgccgcttccgccacgtcctggtc
gacgaataccaggacaccaaccacgcccagtacgtcctggtgcgggagctggtcggacgc
accgacagccggtccaccgactcgagggccgacgcgccagatcacgcgccagaccacgag
gtcccgccggccgaattgtgcgtggtcggcgacgccgatcaatcgatctacgcgttccgc
ggcgccaccattcgcaatatcgaagaattcgaacgcgactaccccgacgccaccactatt
ctgctcgagcagaattaccgttcgacgcagaacattctgtcggccgccaattcggtgatc
gcccgcaactcgggacgccgcgagaagcggttgtggaccgatgcgggcgaaggcgagttg
attgtcggttatgtcgccgacaatgaacacgatgaagcgcggttcgtcgctgaagaaatt
gacgccctcgcagaacgcggcgaaatcacctataacgatgtagcggtcttctatcgcacc
aataactcgtcgcgggcgctggaagaagtcttcatccgcgccggcattccctacaaggtc
gtcgggggagtgcgcttttacgagcgcaaggagatccgcgacatcgtcgcctacctgcgg
gtgctggacaatcccggcgacgcggtcagcatgcggcggatcctgaacaccccgcggcgc
gggatcggtgatcgcgccgaggcgtgcgtggcggtctacgccgaaaacaccggcgccagc
ttcgccgacgcgctggtggcggccgctgaaggcaaagtgccgatgctcaattcccgcgcg
gtaaaggcgatttcgggcttcgtcgaactactcgacgaattgcgcggccgcctcgacgac
gacctcggcgatctggtcgagtcggtgctggagcgcaccggataccgtcgggagctggag
tcctcgactgatccgcaagaattggcccgcctggataatctgaacgaactcgtcagtgtc
gcacacgaattcagcatcgatcaggcgaacaatgcggcgctcgacgagtccgggcaggcg
cccgaggatgaggatgtacccgagacgggggtgctggccgcatttttggagcgggtgtca
ctggtcgccgacaccgatgagattcccgaacacggggccggcgtggtgacactgatgacg
ttgcacaccgcgaaggggctggaattcccggtggtgttcgtcaccggctgggaggacggc
atgttcccgcacatgcgggccctcgacgatcccaccgaactttgcgaggagcggcggctg
gcctatgtggggatcacccgcgcccggcagcggctgtatgtgagccgggcgatcgtgcgg
tcgtcctggggccaacccatgctcaacccggaatcgcgcttcctgcaagagatcccacaa
gaactgatcgaatggcggcgcaccgcgccgacgccgtcctacagcgcaccggtgagcggg
gctggacggttcgggacgccgcgcgtcgcgcccacccgctccggcgcgagcaagcgccca
ctgctggtattggcgcccggcgatcgggtgacccacgacaagtatgggctgggccgggtc
gaagaggtttccggcgtcggcgaatcggcgatgtcgctgatcgacttcggtagttctggc
cgggtcaaattgatgcacaaccacgcgccgctgagcaagctctag
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integrated database retrieval system
