Mycobacterium simiae: MSIM_45940
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Entry
MSIM_45940 CDS
T07396
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
msim
Mycobacterium simiae
Pathway
msim03030
DNA replication
msim03430
Mismatch repair
msim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MSIM_45940
03430 Mismatch repair
MSIM_45940
03440 Homologous recombination
MSIM_45940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msim03032
]
MSIM_45940
03400 DNA repair and recombination proteins [BR:
msim03400
]
MSIM_45940
Enzymes [BR:
msim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MSIM_45940
DNA replication proteins [BR:
msim03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MSIM_45940
DNA repair and recombination proteins [BR:
msim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MSIM_45940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
UVR
Motif
Other DBs
NCBI-ProteinID:
BBX43143
LinkDB
All DBs
Position
complement(4899234..4901171)
Genome browser
AA seq
645 aa
AA seq
DB search
MRVTGGTQLSFADLAVGRETGSDPGWRPAEDIPLRDTTFVVVDLETTGGRSRATDAAAAD
AITEIGAVKVHGGVVLGEFGTLVDPQRSIPPQIVQLTGITTAMVCNAPTIDAVLPMFLEF
AGLDCGAILVAHNARFDVGFLRAAAQSCEIRWPSTQVLCTVQLARRVLSREEAPSVRLGA
LARLFAVATQPTHRALEDARATVDVLHALIERVGNQGVHTYADLRSYLPNVTPTQRRKRV
LADGLPHRPGVYLFRGPANEVLYVGTAVDLRRRVGQYFTGADPRGRMKEMVTLAGAVDHI
ECAHALEAGVRELRMLVAHAPPYNRRSRFPQRWWWVVLSEEAFPRLSVVRAPRHDRAIGP
FRSRTDAADTATLLARFTGIRTCTARLGRSARHGPACPEVEVSPCPAGRDLTATQYAAAT
QRAADLIDGAANGAIAAAVDQVTELAEHRHYESAARLRDRTAAAVEILWRGQRLRALAAL
PELIAAAPDGSGGYHLAVIRYGQLAAAGNARRGVPPMPVIDAITAGAQAILPADAPLGGA
LVEETALIARWLSAPGVRIVRVADDIGWSSPLRSAGPWTGWAAAARSARLAVRQEPVRDG
RGSDSHLLAEPRPTCEQLFGGAGVDGRGGARQPVLPRRQPFSAAG
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtgacgggtgggactcagctgagtttcgccgacctagccgtgggccgcgagacc
ggctcggatccgggttggcggccggccgaggacatcccgttgcgcgataccacctttgtc
gtcgtcgacctcgagacgaccggcgggcgcagccgggccaccgatgcggcggccgccgac
gccatcaccgagatcggggcggtcaaggtccatggcggagttgtactcggcgagttcggc
accctggtggacccacagcgcagcatcccaccccagattgtgcagctcaccgggatcacg
acggcgatggtatgcaacgccccgaccatcgacgccgtgctaccgatgtttctcgagttc
gccggcctggactgcggagcgatcctggtcgcccacaacgcgcgattcgacgtcggcttt
ctgcgggccgcggcgcaaagctgcgaaatccgttggccctcaacgcaagtgctatgtacg
gtgcagctggcccggcgggtactgagccgcgaggaggcgcccagcgtgcggctgggcgcg
ctggcgcggttgttcgcggtcgccacccaacccacccaccgcgccctcgaggatgcccgc
gccaccgtggacgtgctgcacgccctgatcgaacgggtgggcaaccagggcgtgcacacc
tacgccgacctgcgctcctacctgcccaacgtgacgccgacccagcgccgcaagcgcgtg
ctcgccgacggcctgccacaccggccgggggtttacctgttccgcgggcccgccaacgag
gtgctctacgtcggaaccgccgtcgacctgcgccgtcgggtcggccaatacttcaccggc
gccgacccgcgcggacggatgaaggagatggtcacgctggccggcgcggtcgaccacatc
gaatgcgcccacgcactcgaggccggggtgcgcgagctgaggatgctggtcgcccacgct
ccgccctacaatcgccgctcgcggttcccgcagcgctggtggtgggtggtgctcagcgag
gaggcgtttccccggctatcggtggtgcgggccccgcgccatgaccgcgccatcgggccg
tttcggtcccgcaccgacgcggccgacaccgcgacgctgctggcgcggttcaccggaatc
cgcacctgtacggcccggctcggccggtccgctcgccacggcccggcctgtcccgaggtc
gaggtgtcaccctgtcctgccggacgcgacctgaccgcgacgcagtacgccgccgcgaca
cagcgcgccgcggacctgatcgacggcgccgccaacggcgcgattgcggccgcggtcgat
caggtcaccgagctggccgagcaccgccactacgagagcgcggcgcggctgcgcgaccgc
accgccgccgcggtcgagattttgtggcgaggtcagcggctgcgggcactggccgcgctg
cccgagttgatcgccgcggccccggacggcagcggcggctaccacctcgccgtcatccgc
tacggccagctcgccgcggccggcaacgcccgacgtggggtgccgccgatgccggtgatc
gacgccatcacggctggcgcacaagcgattctgccggccgatgcgccgctgggcggggcg
ctggtcgaggagaccgcgctgatcgcgcgctggctgtccgcgccgggagtgcgcatcgtg
cgggtcgccgacgacatcggctggtcctccccgctgcggtccgcgggcccgtggaccggc
tgggcggccgcagcccgctcggcacgactggccgtccggcaggagccggtgcgggacggc
cgcggatccgactcacacctgctggctgaaccgcgcccaacgtgcgagcagttgttcggc
ggcgccggagtcgatggccgcggcggcgcgcgccagcccgtcctcccacgccggcaacca
ttcagcgcggctggatag
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