Mycobacterium simiae: MSIM_53960
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Entry
MSIM_53960 CDS
T07396
Name
(GenBank) putative RNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
msim
Mycobacterium simiae
Brite
KEGG Orthology (KO) [BR:
msim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msim03009
]
MSIM_53960
Enzymes [BR:
msim01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
MSIM_53960
Ribosome biogenesis [BR:
msim03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
MSIM_53960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
BBX43945
LinkDB
All DBs
Position
complement(5748462..5749205)
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AA seq
247 aa
AA seq
DB search
MVEDQGIRLQKVLSQAGIASRRSAEKLILDGRVEVDGRVVTELGTRVDPDASVIRVDGAR
IVVDDSQVYLALNKPRGMHSTMSDDRGRPCIGDLIERKVRGNKKLFHVGRLDADTEGLIL
LTNDGELAHRLMHPSHEVPKTYLATVTGTVPRGVGKKLRAGIDLEDGPARVDDFAVVDAI
PGKTLVRLTLHEGRNRIVRRMLAAVGFPVEALVRTDIGSVSLGKQRPGSIRALRQDEVGQ
LYKAVGL
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atggtcgaagatcaaggcatccggctgcaaaaagtgttgtcccaggccggaatcgcgtcg
cgcaggtccgccgagaagttgatcctcgacggccgtgtggaggtggacgggcgggtcgtg
accgagctgggcacgcgggtcgaccccgacgcctcggtgatccgcgtcgacggcgcccgt
atcgtcgtcgacgattcacaggtatatctcgcgctgaacaagccgcgcgggatgcattcc
acgatgtccgacgatcgcggccggccgtgcattggtgatctgatcgagcgcaaggtgcgg
ggcaacaagaagcttttccacgtgggccggctagatgctgacaccgagggactgatcctg
ctgaccaacgacggcgagctagcgcaccgactgatgcatccgtcgcacgaagtgccgaaa
acctatctggccaccgtcactgggacagtgccccggggggtgggcaagaagctgcgggcc
ggtatcgacctcgaggatggtcccgcgcgcgtcgacgacttcgcggtcgtggatgcgata
ccaggaaagacgttggtgcgcttgacattacatgaaggacgtaatcgcattgtgcgccgc
atgctggcggcggtgggtttcccggtggaggcgctggtccgtaccgatatcggttcggta
tcgctgggcaagcagcggcccggcagcattcgcgcattacgccaggacgaagtggggcag
ctgtacaaagcggtgggactgtga
DBGET
integrated database retrieval system
