KEGG   Magnolia sinica: 131216875
Entry
131216875         CDS       T09699                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like isoform X1
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
msin  Magnolia sinica
Pathway
msin03030  DNA replication
msin03410  Base excision repair
msin03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:msin00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    131216875
   03410 Base excision repair
    131216875
   03420 Nucleotide excision repair
    131216875
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:msin03032]
    131216875
   03400 DNA repair and recombination proteins [BR:msin03400]
    131216875
Enzymes [BR:msin01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     131216875
DNA replication proteins [BR:msin03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    131216875
DNA repair and recombination proteins [BR:msin03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      131216875
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 DNA_pol_B zf-DPOE zf_DPOE_2 DNA_pol_B_exo2 RNase_H_2 TPD52
Other DBs
NCBI-GeneID: 131216875
NCBI-ProteinID: XP_058067455
LinkDB
Position
10:complement(62232469..62388273)
AA seq 2224 aa
MVGESRRRDRGGSSRKFAKPKHIRTAEEELEAKLGFDLFTEGEKKLGWLLSFTSSSWEDQ
DDNKIYSCVDLYFVSQDGSTFKSKYKFSPYFYAATKEKMQMDVDAYLRRRYEGQIAEIEI
VDKEDLDLKNHLSGLHKAYLKIRFDTVQQLMRVKNDLLHVVERNKAKMDAAEAYESIFSG
KSNQRPQDFIDCIIDLREYDVPYHVRFAIDNDVRCGQWYDVSVSSTGVILEKRDDLLQRA
EVHVCAFDIETTKLPLKFPDAEYDLIMMISYMLDGQGYLIINRECVGEDIEDVEYTPKPE
FEGCFKVKNVKNEEELLRHWFAHMQEVKPGIYVTYNGDFFDWPFLESRAAYHGIKMSDEV
GFSCDKIQGECRAKLACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPIEVNPEDMVR
FAMEQPQTMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMPPDEVLRKGSGTLCEMLLM
VQAYKANVICPNKHQADQEKFYNNHLLESETYIGGHVECLESGVFRSDLPTKFQLDPSAY
EQLIRNLDRDLHYALRVEGKMDVDLVSNYEDVKNAIMEKLVMLRDEPMREERPLIYHLDV
AAMYPNIILTNRLQPPSIVSDEVCTACDFNRPGKTCLRTLEWVWRGDIFMAKKSDYYHLK
KQIESELVDNIDGQLSKSFLDLPKTEQQLKLKERLKKYCQKAYKRVLDKPVTELREAGIC
MRENPFYVDTVRSFRDRRYEYKGLNKAWKGKLVEAKASGNSIRIQEAQDMVVLYDSLQLA
HKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGRPLELDTDGIWCA
LPGSFPENFTFKTKDLKKKLTISYPCVMLNVDVARHNTNDQYQTLKDPVSKTYATHSECS
IEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAE
VFDKFLHGTTLEECYSAVAAVANCWLDLLDNQGIDIADSELLDYISESSTMSKSLADYGE
QKSCAVTTARRLADFLGDTMVKDKGLRCQYIVACEPRGTPVSERAIPVAIFETDADIAKF
YLRKWCKISSEVAIRSIVDWSYYRQRLSSAVQKIITIPAAMQKVANPVPRVIHPDWLHKK
VREKEDKFRQRKLIDIFSSLNKDKSLQKDFTQDISNHALDKMNVIDLEDIANKENVSITG
PRPLVRSYEVNKEQHSARLSCPADDMPSSNQHQHPLMPYGNQQQHPTENVDRNVDYQGWL
EVKKRKWKYSREERKRRRLGDLKRSRQSCGTEFPGSVISRKQDQGRNGVNSFFKRHDLAL
VRSYWQIIQLIPSPQPGHFFAWVVSEGIMLKVPISVPRVFYLNTNAPITEEFPGRRVNKT
LPHGRPTFNLIEVITDEDQFRAESRKLAAHLADPEVEGIYETKVPLHYNALLQIGCVCKV
DRTAKNRNFQDGWSLSELHMKTTTECSYLDQAISFFYLYHSGTDGRAVYVVYFPTSGTIF
VVVVNPFQNKELSPSLLEKQFREACQALSVEPSVHGNGISSKVDYVGTVKDAEKLLQRTL
NEYRHEHHGPAIGVIECPNIQAMKSGIHVLDDFPCVNIPCNARDSQYQALGWQIVAGKIG
MQRCAASSQWLNERMALSRYAHVPLGNFELDWLLFTADVFFSRALRDQQQVLWISDDGIP
DLGGINDEDACFADEVHQPVLTYPGAYRKVTVELKIHHLAVNALLKSSQVNEMEGGALLG
FDHHVNSGPLTNEHNGFDEASSCAPAFRVLKQLIQRCMSDAVTSGNVFADAILQHLYRWL
CSPQSKLHDPALHRILHKVMQKVFALLLAELRKLGATIVFADFSKIILDTGKSDLLAAQA
YCDCLLKTLQTRDLFEWIELEPLHFWHSLLFMDQYNFGGIQANAGGGDAFEPPNENIQNE
PQVDIVSSWNIAEYLPKATQDHFVLIVSEFMYIPWKYAQEQAAIRDASREGNFCTQSITV
TAAEAFESRVTEFLKEQISSYFTDKLLRIVRDTLRHIKGKNKAGSDEPTGHGFPRLAGSH
VHMGDPALEFIKHVCAVLTLDQSVQHDILVMRKNLLKLIRVREFAPEAEFRDPCLSFTLS
NVICSYCNDCRDLDLCRDTALLAHEWRCAVPQCGQPYNREEMENALLQIVRQRERLYHLQ
DLVCLKCNQVKAAHLAEQCGCAGSFRCKEDVDEFLTKMQVFLNIAVYQKFQLLQECASWI
LEVH
NT seq 6675 nt   +upstreamnt  +downstreamnt
atggttggtgaaagcaggaggcgggatcgtggagggagctcgagaaagttcgcgaagccg
aagcacatccgcactgctgaagaagagcttgaagccaagctagggttcgatctcttcaca
gaaggcgagaaaaagcttggatggctgctctccttcacatcttcatcatgggaagatcaa
gacgacaacaagatttatagttgtgttgacctttactttgtttctcaggatggatctact
tttaaatccaaatacaagttctcaccttatttctatgctgctacaaaggaaaaaatgcaa
atggatgttgatgcatatctcagaagacgttatgagggacagattgccgaaatagaaatt
gttgataaagaggacctagatcttaaaaaccatctctctggtttgcacaaagcatattta
aagattcgatttgatactgtccaacaactaatgcgtgtgaagaatgatctactgcatgtt
gttgaaagaaacaaagcaaagatggatgccgcagaagcatatgaatccatattcagtggg
aaaagcaaccaaaggccacaggattttattgattgtataatcgatcttcgtgagtatgat
gttccctatcatgttcgcttcgccattgataatgatgtaagatgtggacagtggtatgac
gttagcgtatctagtactggtgttattctcgagaagagggatgatctgctgcaacgtgcg
gaagttcatgtttgtgcatttgatattgagacaacaaaacttcctctgaaatttcctgat
gctgaatatgatttgataatgatgatttcgtacatgttggatggacaaggatatcttata
attaacagagagtgcgtgggagaggatattgaagatgtagagtacactccaaaaccggaa
tttgaggggtgttttaaagtgaaaaatgtgaaaaatgaggaagagcttcttagacattgg
tttgcccatatgcaagaggtgaagcctggtatttacgtcacctacaatggtgattttttt
gattggccattcttggaaagtagagcagcctatcatggaatcaaaatgagtgatgaagta
gggttctcttgtgataaaatccaaggagaatgccgagctaagttggcatgccatttggat
tgttttgcttgggtcaaacgtgacagctatctccctcaaggaagccagggtctaaaggct
gttacaaaggcaaagttgggttatgatccgattgaagtaaatcctgaggatatggttcgc
tttgccatggagcagccacagacaatggcttcttactccgtgtcagatgctgttgcaaca
tactacctatacatgacgtatgttcatccattcattttctcccttgcaactataatccct
atgccacctgatgaggtattgcgaaaaggaagtggtaccctttgtgagatgcttctcatg
gtccaggcatacaaggcaaatgttatctgtcctaacaaacaccaagcagatcaggagaag
ttctacaataaccaccttctggaaagtgagacatatataggtggtcatgtggaatgcctt
gaaagcggcgttttcagatctgatcttcccaccaaatttcagcttgatccatcagcatat
gagcaattaataaggaatctcgatcgagatctgcattatgctttaagagtagagggcaag
atggatgtggatttggtctccaattatgaagatgtgaagaatgctatcatggaaaagctt
gtgatgttgcgagatgaaccgatgcgggaggagcgtcctcttatatatcatctagatgtg
gctgcaatgtatccaaacataattttaacaaaccggctccagccaccgtcaatagtttca
gatgaggtctgcactgcatgtgattttaatcgtccagggaaaacttgtcttcgaacactc
gaatgggtttggcgtggcgatatcttcatggcaaagaaaagtgactattatcatttgaag
aagcaaatcgagtctgagctagttgataatattgatggtcagttgtcgaagtctttcctc
gacctcccaaaaacagaacaacagttgaagctgaaagaacgtttaaagaagtattgccaa
aaggcatataaaagggttcttgacaagccagttactgagcttcgagaagcagggatatgc
atgcgtgaaaatcctttctatgtggacaccgtgcgcagttttcgagacagaaggtatgaa
tacaaaggtcttaataaggcctggaagggaaaattagtagaggcaaaggctagtgggaat
tctataaggattcaggaagcacaggatatggttgttctatatgattcattacagcttgcc
cataaatgtattctcaattccttctatggatatgtcatgcgcaagggtgcaagatggtac
tcaatggaaatggctggagtagtcacttacactggagcaaaaatcattcagaatgctcgc
ttgcttattgaaaagatagggaggccattggaattggatacagatgggatctggtgtgca
cttccaggatctttcccagagaactttaccttcaaaaccaaagacttgaagaaaaagctg
acaatttcatacccttgcgttatgctgaatgttgatgttgcaagacataatacaaatgat
caataccagaccctcaaagatcctgttagcaagacttacgccacacacagtgaatgctct
attgagtttgaagtggatggaccctacaaggcgatgattctcccagcttcgaaggaagaa
ggcattttaattaagaaacggtatgctgttttcaatgacgatggaaccctagcagagctg
aaaggttttgagatcaaacggagaggtgaactgaagctcatcaaagttttccaggctgag
gtttttgacaagttcctccatggaacaaccttagaggaatgctattctgcagttgcagca
gttgcaaactgctggcttgatcttctagataatcaaggcattgatatcgcagacagtgag
ttgcttgactacatatcagaatcaagcacaatgagtaagtccttggctgactacggtgag
cagaagtcatgtgctgttaccactgcaaggagactagctgattttcttggtgatacaatg
gttaaagacaagggattgcgttgccaatatatagttgcatgtgagccacggggaacgcca
gtgagtgagcgtgctatacctgttgcaatattcgagactgatgctgacattgcgaaattc
tatttgcggaaatggtgcaagatttcatctgaagtggcaattagatccattgtcgattgg
tcctattacaggcaacgccttagttcagctgttcagaaaattattactattcctgcagca
atgcagaaggttgctaatcctgtccccagagtaattcatcctgattggctgcataaaaaa
gtccgggaaaaggaggacaagtttcgccaacgaaagctgattgatattttcagctccttg
aacaaagacaaaagtttgcaaaaagactttacccaggatatctctaatcatgcattggac
aaaatgaatgtcatagatttggaagatatcgcaaacaaagagaatgtttccataactgga
cctcgacctctagtccgcagctatgaagttaacaaagagcaacattcagccaggttatct
tgtccagcagatgacatgccttctagtaaccaacaccaacatcctctgatgccttatggt
aaccaacaacagcatcctactgaaaacgttgacagaaatgttgattatcaaggatggctt
gaagtaaagaagagaaaatggaaatatagtcgagaagaaaggaagaggcgcaggttaggt
gatttaaagaggtcacgtcagtcttgtgggactgagtttcctggttctgtgataagtcgt
aaacaagatcagggtaggaatggggttaattcattcttcaagagacatgacttagccctt
gtccgctcttactggcagataatacaactcatcccaagtccacaacctgggcattttttt
gcttgggtcgtttctgaaggaatcatgcttaaggttcctataagtgtccctagagtattt
tacctcaacactaatgcacctatcacggaagaatttcctggaagacgtgtgaacaagact
cttcctcatgggcggcctaccttcaatctcattgaggtgataactgatgaggatcaattc
agggctgaaagcaggaaacttgcagctcaccttgcagatccagaagttgagggaatttac
gagacgaaggtgcctctacattataatgctcttctccagattggttgtgtttgcaaagtg
gatagaacagctaaaaaccgaaatttccaagatggatggagtctaagtgaattacatatg
aagaccaccacagaatgctcttatttggatcaagccatctcgttcttttacttgtatcat
agtgggactgatggaagagcagtatatgttgtatattttcctacatctggtacaatattc
gtcgtggtggtcaatccttttcagaacaaagaattatccccatctcttcttgaaaaacag
ttccgtgaagcttgccaagcactttctgtggaaccttcagtgcatggaaatggcatatct
tcgaaggtggactatgttggaactgtcaaagatgctgaaaagctgttgcagagaacccta
aatgaatacaggcatgagcatcacgggcctgctatcggtgtcattgaatgcccaaatatt
caagctatgaagtcaggtatacacgttctggatgatttcccatgtgtcaacatcccttgc
aatgctcgtgacagccaatatcaggctctaggatggcaaattgtggctggaaaaattgga
atgcaacgatgtgccgcatcatcccagtggttgaatgagagaatggctctttcgagatat
gcgcatgtgcctttggggaattttgaacttgattggcttctatttactgctgatgtcttc
ttttctagggcattacgtgatcagcaacaggtactttggatatctgatgatggcattcca
gatttgggaggcattaatgacgaagatgcatgctttgctgatgaggtccatcaacctgtt
ctcacttatcctggggcatatagaaaagtgactgttgagctaaagatccatcacctagct
gtaaatgctcttctgaagagcagccaagtgaatgaaatggaaggaggggctttgttagga
tttgatcatcacgtgaattctggacccctaactaatgaacataatggctttgatgaagcc
agctcatgtgcacctgcatttcgtgtcctgaagcaattgattcagcgatgtatgtcagat
gcagtcacttctggaaatgtgtttgctgatgcaatattgcaacatctctatcgatggctt
tgcagtccgcaatcaaagcttcacgacccagctcttcacaggatcctacataaggttatg
caaaaggtgtttgcattactgttggctgagctccgtaaattaggtgccactattgtattt
gcggacttctcaaagataattttagacactgggaagtctgatttgttagctgcccaagct
tattgtgactgtttattaaaaactctacaaaccagagatcttttcgaatggattgagctt
gaacctctgcacttctggcactcacttctgtttatggatcagtacaactttggtgggatc
caggcgaatgctggtggtggtgatgcttttgagccacctaatgaaaatatacagaatgaa
cctcaggtagacattgtatcaagctggaatatagccgaatatttaccaaaggcaactcag
gatcattttgttttgattgtctctgaatttatgtacatcccatggaaatatgcgcaagaa
caagctgcaattagagatgcatcaagggagggtaacttctgtactcaatcaatcactgtc
acagctgctgaagcttttgaatcccgtgttacagaatttcttaaagagcagatcagctct
tatttcaccgacaaacttctaaggattgtccgtgatacccttcggcatatcaaaggaaag
aacaaagcaggcagcgatgaacctacaggtcatggattcccacgattagcgggttctcat
gtacatatgggagatcctgctttggaattcattaagcatgtctgtgctgttctcactctt
gaccagagtgttcagcatgatatcctggtgatgaggaagaatctgttaaaactgatccgt
gtgagggagttcgctccagaagcagagtttagggatccttgcctgtccttcactctctcg
aatgtgatctgcagctattgtaatgactgtcgggacctcgacctatgccgtgacacagcg
ttactggcgcacgaatggcgctgtgctgtgccacagtgcggtcagccatacaaccgtgaa
gagatggagaatgcactccttcagatcgtccggcagagagagagactctaccatttacag
gaccttgtgtgcctcaagtgcaatcaggtgaaagctgcccatctggccgagcagtgtggg
tgcgctggctcgttcaggtgtaaggaagacgtagatgagttcctgactaaaatgcaggtg
ttccttaacattgccgtctatcaaaaatttcaacttctccaggagtgcgcttcatggatt
ctggaagttcattaa

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