Magnolia sinica: 131217052
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Entry
131217052 CDS
T09699
Name
(RefSeq) DNA-directed RNA polymerase 3B, chloroplastic isoform X1
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
msin03029
]
131217052
Enzymes [BR:
msin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
131217052
Mitochondrial biogenesis [BR:
msin03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
131217052
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
Motif
Other DBs
NCBI-GeneID:
131217052
NCBI-ProteinID:
XP_058067740
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Position
10:76850808..76882773
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AA seq
883 aa
AA seq
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MASWIPGRVFGEDQSWISSIFPISTDAQKPFEDLGLKKIERSKYNRLRKRQVKLETEAWE
KAAEEYRELEREMCEKKLAPNLPYVKSLFLGWFEPFRDAIVEEQRLQEVKKQKAAYAPYI
GLLPADKMAVIVMHKMMGLLMTGQDDGCVRVVQAAIHIGEAIQQEVRIHIFLERTKKSGR
GKTVEGGECEASSRDEDILRKRVQNLMKKQKRKELQKLLKKKDDMESWGRDAHAKLGSRL
IELLTESACVLRQPDQLGDGPPEIRPAFRHTLKTIIKEAGRRCGKRCGVIECDPLVLKGL
DRTARHMVIPYMPMLIPPKKWKGYHDGGHLFMPSYVMRTHGAKQQQEAIKRVPRKQLQDV
FEALDTLGRTKWRVNRRVLDVIDSLWAKGGCVAGLVDCKDILLPEKPDSEDATEIQKWRW
SVRKAKKCNAERHAQQCDIELKLSVARKMQDEEGFYYPHNLDFRGRAYPMHPHLNHLSSD
LCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVEKLSYDGRLMFVENHLRDICDSAERP
VDGERWWLNAEDPFQCLAACMNLSEALKSSSPHYVISHLPVHQDGSCNGLQHYAALGRNS
LEAAAVNLVAGEKPADVYSGIAARVRDIMERDSMKDPATEPTALLAKILVDQVDRKLVKQ
TVMTSVYGVTYVGAREQIKRRLEEKGNITDDRLLFRASCYAAKVTLTALGEMFQAARGIM
KWLGDCAKVIASENQPVRWTTPLGLPVVQPYRKSERHLIRTSLQVLALQREGSLVDVKRQ
RTAFPPNFVHSLDGSHMMMTAIACGDAGLHFAGVHDSYWTHACDVDKMNVILRQKFVELY
NMPILENLLESFQTSFPTLSFPPLPNRGNFDLEEVLESPYFFN
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctggatccctgggcgtgttttcggcgaagaccaatcttggatttctagcatt
tttccgatcagtactgacgcccagaagccgttcgaagatttgggtctgaaaaagattgag
agaagcaagtacaacaggctgcggaagcggcaggtgaagctggagacagaggcgtgggag
aaggcggccgaggagtacagagaattggagagggagatgtgcgagaagaagctagcgccg
aacttgccatacgtgaagtctctgttcttgggctggtttgagccattcagagatgcgatc
gtggaagagcagagactgcaggaagtgaagaaacagaaggctgcttatgcaccttatatt
gggctgttgccagcggataagatggcggtgatagtcatgcataagatgatggggttgttg
atgactgggcaggatgatgggtgtgtccgggttgtgcaggctgctatccacatcggcgag
gccatccagcaggaggttagaattcatatttttctggagagaaccaagaaatctggaaga
gggaaaacagttgaagggggtgaatgtgaagcttcatctagagatgaggatatccttcgg
aaacgtgtccaaaatctaatgaaaaagcaaaaacggaaggagttgcagaagctgctgaaa
aaaaaggatgacatggagtcttggggtcgggatgcccatgctaagttgggaagtcgtctt
atagaattgttaacggaatcagcatgtgtactacgtcaacctgaccagttgggcgatggc
ccacctgaaattcgacctgcatttaggcacacgctcaaaactatcataaaggaagcaggg
aggagatgcggaaagaggtgtggggttatagagtgtgacccactggtccttaaagggctc
gatagaactgctagacatatggtgattccttacatgccgatgttgataccgccaaaaaaa
tggaaaggttatcatgatggtgggcacttattcatgccttcttatgtcatgcgtactcat
ggagcgaagcagcagcaggaagccattaagcgtgttcccaggaaacagctacaggatgtg
tttgaggccctagatacacttggcagaaccaaatggagggtgaatagaagagtacttgat
gtgatagacagtctttgggctaaaggaggctgtgttgcaggcctggttgattgcaaagat
attctgctaccagagaaaccagactcagaggatgcaacggaaatccaaaagtggaggtgg
agtgtcagaaaagcaaaaaagtgcaatgctgagaggcatgctcagcaatgtgatatagag
ctcaaactttctgtagcaagaaaaatgcaagacgaggaaggattttactatccccataat
ctagatttccgtggccgtgcctatcccatgcaccctcacttaaatcatctaagttccgat
ctttgtcgaggagttctagaattcgccgaaggacgaccactaggaaaatctgggttacgt
tggttgaagatacatttagccaacctgtatgctgggggtgttgaaaagctatcatatgat
gggcgtttaatgttcgtggagaatcatttgcgcgatatatgcgattctgctgagcgacct
gttgatggagaacgctggtggttaaatgctgaagatcctttccagtgtttggcagcttgc
atgaatctttctgaagccttgaagagctcatcaccacattatgtaatctctcacctgccc
gttcatcaggatggttcatgcaatggcttgcaacactatgcagcactgggaagaaacagc
ttggaggcagctgctgtcaatttagttgccggagaaaagcctgcagatgtttattcagga
atagctgctagggttcgtgatataatggaaagggattcgatgaaagatcctgcaactgaa
ccaacagctttactagccaaaattctagttgatcaggtggaccggaaattggtgaaacag
acagtaatgacatctgtgtatggtgttacctatgttggtgctcgtgagcagattaaaaga
agattggaggagaagggcaacattactgatgatagattgctgtttagagcatcttgctat
gctgctaaagtaacattgactgccttaggggagatgttccaggctgcacgtggtattatg
aaatggcttggtgattgtgcaaaggtgattgcttcagaaaatcaacctgtgagatggacg
actcctcttgggctcccagttgtgcagccttacaggaagtctgaaagacatcttataaga
acatcccttcaagttttggctttacagcgggagggtagtttggttgatgttaaacggcaa
aggacggcattccctcctaatttcgtacactcccttgatggttcacacatgatgatgaca
gctatcgcctgtggggatgccggtttgcattttgcaggggtgcatgactcctactggacc
cacgcatgcgatgtcgacaagatgaacgtcatcctaagacaaaagttcgttgagctctac
aacatgccaatactagagaacttgctcgagagctttcaaacatcctttccgactttgagt
tttcctcccctcccaaaccgaggcaattttgacctggaagaagttcttgaatctccctat
tttttcaattga
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