Magnolia sinica: 131217116
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Entry
131217116 CDS
T09699
Name
(RefSeq) preprotein translocase subunit SCY1, chloroplastic
KO
K10956
protein transport protein SEC61 subunit alpha
Organism
msin
Magnolia sinica
Pathway
msin03060
Protein export
msin04141
Protein processing in endoplasmic reticulum
msin04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
131217116
04141 Protein processing in endoplasmic reticulum
131217116
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
131217116
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msin04131
]
131217116
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
msin02044
]
131217116
Membrane trafficking [BR:
msin04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
SEC61 complex
131217116
Secretion system [BR:
msin02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
131217116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecY
TssN
Motif
Other DBs
NCBI-GeneID:
131217116
NCBI-ProteinID:
XP_058067863
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Position
10:complement(80089139..80107764)
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AA seq
539 aa
AA seq
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MLLTVRDASWIVISPNPKNFSPKPPNSICKATLTIPSKPRSTSWKKFNLPFQNNNRCIQQ
TDGSGFDPLGLDVGTSPGLSAAWETIMNLFSQTFESTSSTRKEKASARGVAAAIEDSSID
IGDFFKGPLPGKFLKLLGYLALSRLGIYIPLGGVNRDAFVGNLDQNSLLSTLDSFSGGGI
GRLGICSLGIVPFINAQIVFQLLTQIYPKLQDLQKREGEAGRKKVLQYTRYASVGFAVVQ
AIGQVLFLRPYVNDFSTEWVLSSVTLLTLGSVFTTYIGERISDLKLGNGTSLLIFTSIIS
YLPASFGRTAAEAFQDGNYVGLATIVVSFFLLVLGIVYVQEAERKIPLNYASRYTSKSGG
LQKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGAAALKQAAIALNPGGSLYLPTNI
LLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFIKTVLSRISVLGSAFLA
VLAAGPAVVEQITHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYDIDY
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgttgctaacggtaagagacgcttcttggattgtaatctctccaaatccgaaaaacttc
tctccaaaacctccaaacagtatttgcaaagctaccctcacaatcccttcaaaacccaga
agtaccagctggaaaaaattcaatctccctttccagaataacaacagatgtattcaacag
actgatggctcgggttttgatcctttgggtttggatgtgggaacatctccaggtcttagt
gctgcctgggaaactattatgaatttattttcccaaacatttgaaagcacatcaagtaca
aggaaggagaaagcttccgctcggggagtggcagctgcaattgaagatagttccattgac
attggtgactttttcaaaggcccactacctgggaagtttctgaagctgttagggtattta
gcgttatctcgacttggaatatacatacctttaggtggcgtcaaccgggatgctttcgtt
ggcaatttggatcagaacagtctgttgagcactttggattctttttctggtggaggcatc
ggccgcctgggaatatgctctcttggtattgttccctttatcaatgcacagattgtattt
cagctacttacacagatatatcccaagctgcaagaccttcaaaagagagaaggtgaagca
ggcaggaagaaagttcttcaatacactcgctacgcttctgttgggtttgcagtagtacag
gctattgggcaagtactttttctccgtccgtatgtcaatgacttcagtacagaatgggtg
ttgtcatcagtgacactgttgacactcgggtcagtgtttacaacttacattggtgaaagg
atatctgacctgaaacttggaaatggaacatctctcctgattttcacaagcattatctcc
tacttacctgcatcatttgggagaacagctgcagaagcatttcaggatggaaactacgtt
ggacttgccactattgttgtttcattcttcctattagttcttggaattgtatacgtccag
gaagctgagaggaagatcccacttaactatgcttcaagatacaccagtaagagtgggggg
cttcaaaaatctgcctaccttcctttcaaggtgaatagttcaggagtgatgcctatcata
ttttcaacatcatcgttggctcttcctggcactttagctcgattcactggtgcagctgct
ttgaaacaggccgcaattgctttaaatccaggaggttctctgtatctccctacaaacatc
ttattaatagccttctttaattactactatacttttctacaattggaccccgatgatgtg
agtgagcaattgaaacgccaaggtgcgtcaatcccactcgtccggcctggcaaaagcaca
gctgcattcattaaaacagttcttagtcggatatctgttctgggttctgccttcttggca
gtgttggctgccggtcctgccgtggtcgaacagatcacacacctgactgcatttcgtgga
tttgctggcacatccgttctcattcttgttgggtgcgcaaccgacacggcaaggaaagtt
caagcagaaatcatatcccaaaagtacaagaacatagagttctatgatattgattattga
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