Magnolia sinica: 131217148
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Entry
131217148 CDS
T09699
Name
(RefSeq) vacuolar protein sorting-associated protein 52 A isoform X1
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msin04131
]
131217148
Membrane trafficking [BR:
msin04131
]
Protein recycling
Others
EARP complex
131217148
Endosome - Golgi transport
Tethering complex
GARP complex
131217148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
Motif
Other DBs
NCBI-GeneID:
131217148
NCBI-ProteinID:
XP_058067916
LinkDB
All DBs
Position
10:81592931..81636952
Genome browser
AA seq
739 aa
AA seq
DB search
MASASSKEGDSYGETHDIQKNGFDLGLFVGDLAFEDDACSDDVSLEGLQQELEECKNDDV
VANILAKGTKLREYAKGVEKDVRQVELDSIQDYIKESDNLVSLHDQIHDCDGILSQMETL
LSGFQAEIGSISSEIKSLQEKSMGMGLKLKNRKVAESKLARFVEDIIVPPRMVDIIVDGE
VNDEYMRTLELLSKKLKFIEVDSMVKSSKALKDVQPELEKLRQKAVSKVFDFTVQKLYAL
RKPKTNIQILQQSVLLKYKYVVLFLKEHGKEIYGEVRGAYIDTMNKVLSAHFRAYIQALE
KLQLDIATANDLIGVETRSTSLFSRGREPLKNRSAVFALGERINILKEIEQPALIPHIAE
ASSLKYPYEVLFRSLHKLLMDTATSEYLFCDDFFGEESIFYEIFAGPFAVIDEHFNSILP
NFYDAIGLMLMIRIIHQHQLIMSRRRIPCLDSYLDKVNIALWPRFKMVFDMHLNSLRNAN
VKTLWEDDVHPHYVMRRYAEFTASLIQLNVEYGDGQLELNLDRLRMAVDELLIKLAKTFT
KPKLQTVFLINNYDMTIAVLKEVGTEAGKAQMYFEDLLKTNTAIFVEELLLEHFNDLIKF
VKTRACKHRNKTLQLNPGHSIKKKKNHKEKLIYMMFVSAEDPSSSLEKHITVADVEPLVK
DFASRWKAAIELMHKDVITSFSNFLCGMEILRAALTQLLLYYTRLTDCIKRIVGGNALNK
DLVSISSIMYEIRKYSRTF
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgcgtcgagcaaagagggtgactcctatggtgagacacatgatatccaaaag
aatggatttgatttaggattgtttgttggggacttggcttttgaggatgatgcttgcagt
gatgatgtatcactggaggggctacaacaagaactagaagaatgtaagaatgacgatgta
gtggcaaatatattggctaaaggcacaaaattgcgtgaatatgcgaagggtgttgaaaag
gatgtgcgtcaagttgaattggactcaattcaggactacataaaagagagtgataacttg
gtctccctacatgatcaaattcatgattgtgatggcattttatcacagatggaaactctt
ctcagtggattccaggctgagattggttccataagttcagaaataaaaagtcttcaggag
aagtctatgggtatgggtctgaagctgaaaaatcgcaaggtagcagagtcgaaattggcg
agattcgttgaagacattattgtccccccaaggatggttgacataattgttgatggggag
gtgaatgatgaatatatgagaacacttgagttgctaagtaagaagctaaaatttattgaa
gtggactctatggtcaaatcgtcaaaggctctgaaagatgttcagcctgaactggaaaaa
cttcggcaaaaggcagtctcaaaggtatttgacttcactgttcaaaagctttacgccttg
agaaagcccaaaacaaatattcagatcctacaacaaagcgttcttctaaaatacaagtat
gtggttctttttcttaaagaacatggcaaggagatttacggcgaggttcgtggcgcctat
attgacacaatgaacaaggtactaagtgcacatttccgtgcttacatacaagcactggag
aaactacaactggatatagcaacagcaaatgatttgattggagtggagaccaggagtact
agccttttttcaagagggagagaacctttgaagaaccgatctgctgtttttgcattgggg
gagaggataaacattttaaaggaaattgaacaacctgcattgattccacatatagccgaa
gctagctctctgaagtacccttatgaagttctctttaggagcttgcataagcttctgatg
gatactgctacttcagaatatcttttctgtgatgatttctttggggaagaatctattttc
tacgaaatatttgcaggaccatttgcggttattgatgaacatttcaattcaattcttcca
aatttttacgatgcaataggtttaatgcttatgatccgcataatacaccaacatcagtta
attatgtctcgacgtaggattccatgcttggattcgtacttggataaggtcaatattgcg
ctgtggcctcgtttcaaaatggtctttgacatgcacctcaacagcttgcgtaatgccaat
gtaaagacattatgggaggacgatgttcatccacattatgtcatgagacgttatgccgag
ttcacagcctcacttattcaactcaatgttgaatatggagatggtcagcttgaattgaat
ctggatcgacttcgaatggccgttgatgagttgcttattaagcttgccaaaacattcacc
aagccaaagctgcaaacagtgttcctcataaacaattatgatatgactattgctgtgtta
aaggaagtaggtacagaagctgggaaggcacagatgtattttgaagatctgctgaagacc
aacaccgctatttttgtggaagaattgctgctggagcatttcaatgatcttatcaaattc
gtaaagacccgtgcctgtaagcatcgaaacaaaaccttacagctaaatcctggacattca
attaaaaaaaaaaaaaaccataaagagaagcttatttacatgatgtttgtatcagccgaa
gacccgagttctagcttagagaaacacatcaccgtcgctgatgttgaaccgctggtcaaa
gatttcgcaagccgatggaaagcggcaatagagctaatgcacaaagacgtcattacttct
ttcagcaacttcttgtgcggcatggagattttaagagccgcactgacgcagctgcttctt
tattacaccaggctgacggattgcataaagagaattgtaggcggcaatgcgctgaacaag
gatctggtttccatatcgtcgataatgtacgagatcagaaagtactcgaggacattttag
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