Magnolia sinica: 131217251
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Entry
131217251 CDS
T09699
Name
(RefSeq) coatomer subunit beta-1
KO
K17301
coatomer subunit beta
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msin04131
]
131217251
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msin04147
]
131217251
Membrane trafficking [BR:
msin04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
131217251
Exosome [BR:
msin04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
131217251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT_2
Cnd1
HEAT
Coatomer_g_Cpla
Alpha_adaptinC2
RAG2
Motif
Other DBs
NCBI-GeneID:
131217251
NCBI-ProteinID:
XP_058068091
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Position
10:complement(84854079..84866580)
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AA seq
949 aa
AA seq
DB search
MEKSCSLLIHFDKAAPSLANEIKEALEGNDVEAKIDAMKKSIMLLLNGETLPQLFITIVR
YVLPSEDHTVQKLLLLYLEIIEKTDSKGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFL
CRLNEAEIIEPLIPSVLSNLEHRHPFIRRNAILAVMSIYKLPQGEQLLADAPEVIERMLA
SEQDPSAKRNSFLMLFTCAQERAVNYLLSNVDSVPEWNELLQMVVLELIRKVCRTNRGEK
GKYIKIIISLLNAPSAAVIYECAGTLVSLSSAPTAIRAAANTYCQLLLSQSDNNVKLIVL
DRLNELKTLHRDIMVDVIMDVLRALSSPNLDIRRKTIDIALELITPRNIDEVVLMLKKEV
VKTQSGELEKNGEYRQMLVQAIHSCAIKFPEVASTVVHLLMDFLGDSNVASAMDVVVFVR
EIIETNPKLRVSIITRLLDTFYQIRVARVCSCALWIIGEYCLSLSEVESGISTIKQCLGD
LPFYTVPEEGDVTDSSKQPPQPSSITVSSRRPAILADGTYATQSAASETAISAPTIVQGS
LASPGNLRSLILTGDFFVGAVVACTLTKLVLRLEEVQPSRAEVNKATSEALLIMVSMLQL
GQSSFMPHPIDNDSYERIVLCIRLLCNTGDEVRKIWLQSCRQSFVKMLADKQFRETEEIK
AKAQISHAQPDDLIDFYHLKSRKGMSQLELEDEVQDDLKRATGEFTKDGDDANKLNRILQ
LTGFSDPVYAEAYVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVERPQNYTLA
PESSKQIRANIKVSSTETGVIFGNIVYETSNVLERTVVVLNDIHIDIMDYISPATCADVA
FRNMWAEFEWENKVAVNTVIQDEKDFLNHIIKSTNMKCLTAPSALDGECGFLAANLYAKS
VFGEDALVNVSIEKQVDGKLSGYIRIRSKTQGIALSLGDKITLKQKGGS
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggagaaatcctgcagtctcctgatccacttcgacaaggccgccccctccctggctaac
gagatcaaggaggcccttgaaggcaacgacgtggaggcgaagatcgatgccatgaagaaa
tcgatcatgcttctcctcaacggcgaaaccttgccccagctcttcatcacgatcgtccgt
tacgtcctcccctccgaagatcacacggtccagaagctcctcctactatacctagagatc
atcgagaagaccgattcgaagggtcgtgtcctccctgaaatgatcttgatctgccagaat
ctccgcaacaatctccagcatccgaacgagtacatccgtggcgtcacacttcgattcctc
tgccgcctcaacgaggccgagatcatcgagccgctgatcccatctgtcctctcgaacctc
gagcatcgccacccgttcatccggcgaaatgcgatcctggccgtcatgtcgatctacaag
ctcccgcagggggagcagctgctggctgatgcgccggaggtgattgagcggatgctggca
tccgagcaggacccgtctgcaaagcggaattccttcctgatgctgttcacctgcgcccag
gagcgggctgtgaactacttgctctcgaatgttgacagcgtcccggagtggaacgagctg
ctgcagatggttgtgctggagctgatccggaaggtctgcaggacgaaccgaggggaaaag
ggtaagtacatcaaaatcatcatatctctgctgaatgccccctcggctgctgttatttac
gagtgcgccgggacgctcgtgtccctctcgtcggcccccacagcgatccgggctgcagcc
aacacatactgccagctcctcctgtcacagagtgacaacaacgtgaagctcattgtgctt
gatcggctcaatgagctcaagaccctgcaccgggacatcatggttgatgtgatcatggac
gtgctgcgggccttgtcaagcccgaacctcgacatccggcggaagacgattgacatcgct
cttgaattgataaccccacggaacatcgatgaagtcgtgcttatgctgaagaaggaagtg
gtgaagacacagagtggcgagcttgagaagaacggggagtacaggcagatgctggtccag
gctattcattcgtgcgcgatcaaattcccggaggtcgcaagcacggtggtccacctcctg
atggacttcctgggtgacagcaatgtggcatctgcgatggacgtggtcgttttcgtccgc
gagatcattgagacaaacccaaagctccgcgtgtctataatcacgaggctcttggacaca
ttctatcagatccgggtggcacgggtctgttcgtgtgcactttggatcataggagagtat
tgcttgtcattgtccgaagttgagagtgggatttcgacgattaagcagtgtctaggggat
ctgccgttctatacagtccccgaagaaggggatgtaactgattcttcaaaacagccacca
caaccgagctctatcactgtttcttctaggagacctgcgattcttgcagatgggacctat
gccacccaaagtgcggcatcggagactgccatatccgccccaaccattgtccaaggatcc
ttagcttcacctgggaatttgaggtcgctgatccttacgggtgacttttttgtcggtgca
gttgtggcttgcacgttgactaagcttgttctgagattggaagaggttcagccgtcaagg
gccgaagtgaacaaagcgactagtgaggcgctgctgatcatggtctcaatgctccaattg
gggcaatcttcattcatgccccacccgattgataacgattcttatgaacggattgtgctt
tgcataaggctgttgtgtaatacgggcgatgaagtgaggaagatatggttgcagtcatgc
cgccagagtttcgtgaagatgcttgcagataagcagttccgtgaaacggaggagataaaa
gcaaaggcccagatatctcatgcccaaccagatgaccttattgacttttatcacttgaag
agtagaaagggcatgagccagctagaattagaagatgaagttcaagacgatttaaaacgt
gcgactggagagttcaccaaggatggagatgatgcaaataagctgaatcgcattcttcaa
ctcacaggcttcagtgatcccgtgtatgctgaagcatatgtgacagttcatcattatgac
attgtccttgatgttacagtcatcaaccgaactaaggagacacttcagaacttgtgcttg
gagttggcaaccatgggggatctcaaacttgttgagcgtccccagaactatacccttgct
ccagaatcaagcaagcaaatacgcgccaatattaaggtctcttcaactgaaactggagtc
atatttggtaacattgtttatgagacttcgaatgtgcttgaacgaacagttgtggtcctc
aatgatatccacatcgacatcatggactacatttctccagcaacctgtgctgatgtggca
tttagaaacatgtgggctgaattcgaatgggaaaacaaggtggcggtgaatacagtgatt
caagatgagaaggattttttgaatcacattatcaagtcaacaaatatgaagtgcctcact
gcaccatctgcccttgatggtgagtgcggatttctggctgcaaatctgtacgcaaagagc
gtgttcggggaggatgctttggtgaatgtgagcatcgagaagcaagtggatgggaagctg
agcgggtacatcaggataaggagcaagacccaagggatcgccctcagcttaggagacaag
atcacactcaaacagaagggcggcagttga
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