Magnolia sinica: 131217256
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Entry
131217256 CDS
T09699
Name
(RefSeq) squalene synthase 2-like isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
msin
Magnolia sinica
Pathway
msin00100
Steroid biosynthesis
msin00909
Sesquiterpenoid and triterpenoid biosynthesis
msin01100
Metabolic pathways
msin01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
131217256
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
131217256
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
msin01006
]
131217256
Enzymes [BR:
msin01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
131217256
Prenyltransferases [BR:
msin01006
]
Terpene biosynthesis
Squalene/phytoene synthase
131217256
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
131217256
NCBI-ProteinID:
XP_058068106
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All DBs
Position
10:complement(85154492..85181409)
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AA seq
416 aa
AA seq
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MGSLGAILKHPEDFYPLVKLKIAAIQAEKQIPDDPHWAFCYIMLHRVSRSFALAIQQLRP
QLRNAVRTSLSLHISPIDQFLNIYLSQDDTSIASDIKVPVLLSFHRCIYNRDWHFSCGTK
DYKVLMDKFHYVSTAFLELRRSYQEAIEDITKRMGAGMAKFICKEVETVDDYEEYCHYAA
GLVGLGLSKLFHASGLEDMAPDSLSNSMGLFLQKTNIIRDYLEDINEIPESRMFWPRQIW
SKYANKLEDLKYEEYSVKAVQCLNEMVTNALAHVEDCLEYISSLQDPSIFRFCAIPQIMA
IGTLALCYNNLEVFRGVVKMRRGLTAKVVVQTRTMSDVYGAFFDFSCMLKAKVDKNDPNA
TQTLNLVEAIQKACRDSGMLNTRRPYVDASKLMYKTALIIMFFMLLSILFGFLSIK
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggggagtttgggagcgatactgaaacatccggaggatttctaccctcttgtgaagctg
aagatcgcagccatccaagcagagaagcagatcccggacgatcctcactgggccttttgc
tacatcatgctccatagggtctctcgaagcttcgccctcgccatccaacagctacgccct
cagctccgcaatgccgtccgtacatccctctcgctccacatttccccgattgatcaattt
ctcaatatctatctctctcaggatgatacaagcatagcttctgatatcaaagtaccagtt
ctgctatcctttcatcgttgcatatataaccgtgattggcatttctcatgtggtacgaag
gactacaaagttctcatggataaatttcattacgtttctactgcttttttagagctcaga
agaagttatcaagaggcaattgaagacattacgaaaagaatgggtgcagggatggcgaaa
tttatatgcaaagaggtggaaactgttgatgactatgaagagtattgccactatgcagct
ggacttgttgggttaggattatccaagctatttcatgcctctggattggaagacatggct
ccagactctctctccaattctatgggtttatttctacagaaaacaaacattatccgtgac
tatcttgaggacataaatgagataccagagtcacgcatgttctggcctcgtcaaatatgg
agtaaatatgctaacaaactcgaggacttgaaatacgaggaatattcagtcaaagcagta
caatgcttgaatgaaatggtcaccaatgcattggcacatgtggaagattgcttggagtac
atttcttctttgcaggatccatcaatcttccgattttgtgctattccccagattatggca
attggaacattagctttgtgctataacaatcttgaagtcttcagaggagtcgtgaaaatg
agacggggtctcactgctaaggttgttgtccaaacaagaacgatgtctgatgtttatggt
gctttctttgatttttcttgcatgctgaaagctaaggttgataagaatgatcccaatgcc
acacaaacgcttaacctggttgaagcaatacagaaagcttgcagggattccggaatgcta
aatacgaggagaccttacgtggatgcaagcaagctaatgtacaagacggctctgattatt
atgttcttcatgctgctatcaatcttgtttgggtttctctcaattaagtga
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