Magnolia sinica: 131217614
Help
Entry
131217614 CDS
T09699
Name
(RefSeq) U3 small nucleolar RNA-associated protein 21 homolog isoform X1
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
msin
Magnolia sinica
Pathway
msin03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
131217614
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msin03009
]
131217614
Ribosome biogenesis [BR:
msin03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
131217614
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
EIF3I
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_VPS8
PEP5_VPS11_N
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_LRRK2
WD40_like
Nbas_N
Motif
Other DBs
NCBI-GeneID:
131217614
NCBI-ProteinID:
XP_058068537
LinkDB
All DBs
Position
10:87795029..87813406
Genome browser
AA seq
944 aa
AA seq
DB search
MGIFEPFRAIGYITTGVPFTVQRLGTETFVTVSVGKAWQIYDCAKLTLVLVGPQLPKKIR
ALACYRDYTFAAYGNSIGVFKRAHQVATWSRHTEKVNSLLLFGEHIISIDVKGNLFIWEY
KGIEKNLAPVGHILLEEKFSPSCIVHPDTYLNKVLIGSHEGSVQLWNISTKKKLYEFKGW
NSSIHCFVSSPALDVVAVGCADGKVHLHNLRYDEEVVTFTHSTRGAVTALSFRTDGQPLL
ASGGSSGVLSIWNLEKRRLQMVIREAHDSSIISLHYFANEPVLMSSAADNSIKMWIFDTT
DGDPRLLRFRSGHSAPPLCVRFYGNGRHILSAGQDRAFRLFSIIQDQQSRELSQRHVSKR
AKKLKVKEEEIKLKPVIAFDFAEIRERDWCNVVTCHMDTPRAYVWRLQNFVLGEHILTPS
PENPTPVKSCCISACGNFAVLGMEVGWIERFNLQSGISRGGYVDISEARSCAHDGEVVGV
ACDATNSLMISAGYHGDIKVWDFKGRELRSRLEVGCPVVKFVYHRTNGLLATVAEDMILR
LFDVVALRMVRKFEGHTDRVTDLCFSEDGKWLLSSSMDGSLRIWDVIFARQIDAMHVDVS
ITALSLSPNMDILATSHVDQNGVYLWVNQAMFSGVSHVHPYASGKEVVSVQLPAVSSKEG
SEPENEESDHPHERQSQNKDAVSSPHFSHQIPDLVTLSMLPKSQWQSLINLDIIKVRNKP
IEPPKKPEKAPFFLPSVPSFSGEILFKPSDVNTEEDKDTRGDEAARSMRKPYLPSPFLEL
LQSAVEMKNFSSFTDYIKGLSPSSLDMELRMLQIIDDDDLQEPEQRPELHSIELLLDYFI
HEISCRNNFEFIQAVIRLFLKVTCGFENLILVTSGQDDSKLTIPDALGRSTISMRRMDCD
FKKSSTCILPGPALRNTRPLIFTDLHVTSCDSCGSILCCNMKFG
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgggcattttcgaaccttttcgagcgattggttacatcacgaccggcgtccccttcacc
gtacagaggctgggaactgaaaccttcgtcaccgtcagcgtcgggaaagcctggcagatc
tacgactgtgcgaaactgacattggtgcttgttggacctcaattgccaaagaagatccga
gctcttgcatgctatcgagactatacttttgctgcatatggaaacagcattggagttttc
aaacgtgctcatcaggttgcaacatggagcaggcatactgaaaaggttaattcgttgctc
ttgtttggggaacatatcataagtattgatgtcaagggtaatctgttcatttgggaatat
aaaggaattgaaaagaatcttgcaccagtcggacacattctgttagaagagaaattctct
ccaagttgcatagtgcatccagatacttatctaaacaaggttcttatcgggagccatgaa
ggttctgtgcagctctggaatatcagcacaaagaagaaactttatgagtttaaaggctgg
aattcatctattcattgttttgtttcctcacctgcactagatgtagtagcagtaggctgt
gctgatggcaaagttcatcttcataatttacggtatgatgaagaggtagttacattcaca
cattctacgcggggtgctgtgactgccttgtctttcaggactgatggacagcctcttcta
gcatctgggggttcatcaggtgtcttaagcatatggaatcttgagaaaagaaggctacaa
atggtcataagagaagcacatgacagttcgattatatcactccattattttgctaatgag
cctgttcttatgagttctgctgctgacaattcaatcaaaatgtggatttttgacacaact
gatggggatcctcgtcttttacgcttccgaagtggccatagtgctcctcctctatgtgtt
aggttctatggtaatggaaggcacattttgtcggctggacaggatcgcgcttttcggctt
ttctctattatccaggatcaacaaagcagagagctttctcaacgccatgtatctaaaaga
gcaaagaaacttaaagtgaaggaggaagagataaagttgaagccagttatcgcatttgat
tttgctgaaatccgtgagcgtgattggtgcaatgtggtgacttgtcatatggatactcca
agagcatatgtgtggcgtcttcagaactttgtcctcggggagcatatattaacaccatcc
ccggaaaacccaacacctgttaagtcctgttgcatcagtgcctgtggtaactttgctgtt
ctaggaatggaggttggttggattgaaagatttaatcttcaatctggaatcagccgtggc
ggttatgtggatatttctgaagcaagaagttgtgctcatgatggagaagtggttggagtt
gcttgcgatgccacaaatagtctcatgataagtgcaggatatcatggtgatataaaggtg
tgggatttcaagggacgtgaactgagatcaagattggaagttggttgccctgtcgtcaaa
tttgtctatcatcggacaaatggtcttttggcaactgtagcagaagatatgattctccgt
ttgtttgatgttgtggctctacggatggttcgtaaatttgaaggtcatacagaccgtgtt
actgacctatgtttcagtgaggatgggaaatggcttttatcttcaagcatggatggtagc
cttagaatttgggatgttatttttgcaagacagatagatgcaatgcatgttgatgtttct
atcacggcgttatctctgtcaccgaatatggatattttggcaacttctcacgttgatcaa
aatggtgtctacctgtgggttaatcaggctatgttttctggagtctctcatgtgcaccca
tatgcaagtgggaaagaagtcgtgagtgtccagttgccggctgtttcttcaaaagaaggt
tctgagcctgagaatgaggaatctgatcatccccatgagcgtcaatcccaaaacaaggat
gctgtctcttctccacatttcagtcatcaaatccctgatcttgtcaccctttcgatgcta
cccaagagccagtggcaaagtctgatcaatctagacattataaaggtccgcaataagccc
attgaaccaccaaagaagccagagaaagctcctttcttcttgccttcagttccatctttc
tcaggagaaatattatttaagcctagcgatgtaaataccgaagaggataaggatacaaga
ggtgatgaagcagcacgcagtatgagaaagccttatttaccatctccatttctagaacta
cttcaatctgctgtggagatgaaaaacttctcatcgttcacagactacatcaaaggctta
tcaccatcatcgctggatatggagctgcggatgcttcagattatagatgatgatgatctg
caagaacctgaacagaggccggaattgcattctattgaacttctattggattattttatt
catgagatttcctgcagaaacaactttgagttcattcaagctgttattaggctgtttctc
aaggtaacttgcggttttgaaaatctgatcttggtgacttctggtcaggacgactcaaaa
ctcacgattcctgatgcattaggccgttcaaccatttcaatgaggcggatggattgtgat
ttcaagaagtcatctacatgcattttaccgggcccggctttaaggaataccaggccttta
atattcactgatttacatgttacttcttgtgatagctgtggaagcattctctgttgtaac
atgaagtttggttga
DBGET
integrated database retrieval system
