Magnolia sinica: 131219226
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Entry
131219226 CDS
T09699
Name
(RefSeq) DNA topoisomerase 1 alpha-like isoform X1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
msin03032
]
131219226
Enzymes [BR:
msin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
131219226
DNA replication proteins [BR:
msin03032
]
Eukaryotic type
DNA Topoisomerases
131219226
BRITE hierarchy
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Phage_GPO
RodZ_C
Motif
Other DBs
NCBI-GeneID:
131219226
NCBI-ProteinID:
XP_058070248
LinkDB
All DBs
Position
11:complement(62294207..62325964)
Genome browser
AA seq
976 aa
AA seq
DB search
MMAVHGCVNQNLLDDDDDDTPLVFKRNGPASRQNQLNSALKKPSSQRHDGSSGRPISDAR
ASDRQHSNLPKTKMVSPAKVSTERSTVANAKASIPVKVSTERSTVANLKASIPDRPKYSS
VPNSAAYNKEKKPLDKSPVKSAVDPDEDSDDNIPLSSRMPAAGQKSNSSHVSRDHNSSIP
GSSIPRKTKTIINKSADESADEKPLSSKISKISIKKSVDESADEKPLSSKISKISIKKSA
DDSADEKPLSSKISKISIKKSDDDSGDEKPLSSRLSKPGVGASTKISCDSDDEKPLFAKF
QQNGYSKRDSISKNEQSLKSNTGLNKRPASEINTSPPSSSVKKLKISSSSSFAKVKQEPE
VKKEEKMDDEDHIPIAQRMKKSVPLDNRSFSKKPTKVVSSSFKKTTKKSKKVMKNSKYSK
SMKVPPGSGGGQKWTTLEHNGVIFPPPYKPHGVKMLYNGQPVDLTPEQEEVATMFAVMKD
TEYATKQTFIDNFMNDWRVILGRNHVIKKFELCDFTLIYEWHQKEKDKKKQMTTEEKKAL
KEEKLKQEDKYMWAVVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIG
KGASIPECPIPGERWKEIKHDNTVTWLAFWNDPINSKESKYVFLAASSSLKGQSDKEKYE
KARMLKNYIDDIRSTYTKDFGSKDISKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCT
LKVENVTLLPPNKLQFDFLGKDSIRYFNTVEVELPVYKAISQFQTGKKDGDDLFDKLDTS
KLNAHLKELMPGLTAKVFRTYNASITLDDMLNKETKDGNVAEKIAVYQHANKEVAIICNH
QRSVSKSHTAQMSRLSEKMAELKSVLEELKVDLSRAKKGKPPLRDADGKTKKNLSPEAIE
KKIAQTNVKIEKMELDMKIKEDLKTVALGTSKINYLDPRISVAWCKRHEVPIEKIFNKSL
LAKFAWAMDVEPTFRF
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgttcacggttgtgttaatcaaaatcttcttgatgatgatgatgatgataca
cctttagtttttaaaaggaatggcccggcatccaggcaaaatcaattgaattctgcacta
aagaagccatcatctcaaaggcatgatggatcttcaggaaggcccatttctgatgcacgt
gcttctgatcgtcaacactccaatttgccaaagactaagatggtttcacctgcgaaggta
tcaacagaaaggtctactgttgctaatgcgaaagcttcaatacctgtgaaggtatcaacg
gaaaggtctactgttgctaatttgaaagcttcaatacctgatcggccaaaatattcatca
gtaccgaactcagcagcttataataaggaaaagaagcctctggataagtctcctgttaaa
tctgccgttgatcctgatgaagattctgatgataatataccattgagctctcgaatgcct
gcagcaggtcaaaaaagcaattcttcccatgtttcaagggatcacaattcatctattcca
ggttcatccattccaagaaagacaaaaaccatcattaataaatccgccgatgaatcagca
gatgagaaaccattatcgtccaagatatcaaaaatcagcattaagaagtcggtcgatgaa
tcagcagatgaaaaaccattatcttccaagatatcaaaaatcagcattaagaagtctgcc
gatgattcagcagacgagaaaccattatcttccaagatatcaaaaatcagcattaagaag
tctgacgatgattcaggagatgagaaaccattatcttctaggttatcaaagcctggtgtt
ggtgcatctactaaaatctcatgtgactcggatgacgagaaacctttgtttgctaagttt
cagcaaaatggttacagcaagagggattcaatttcaaaaaacgaacagtctttgaagtcc
aacacagggttgaacaagaggccagcaagtgaaatcaatacatcacccccatcttcttct
gttaaaaagctaaaaatttctagttcctcttcattcgcgaaagttaagcaagaacctgaa
gtgaaaaaggaagaaaaaatggatgatgaagaccacattccgatcgcacagcgaatgaaa
aagtcagttcccttagataatcgatcattctcaaagaaaccgactaaggttgtttcttct
tcgttcaagaaaacaactaagaaatcaaagaaagtgatgaagaattctaaatactccaag
tcgatgaaggtgccacccggctctggtggaggtcaaaaatggacaaccttggagcacaat
ggtgtcatttttcctcccccatacaagcctcatggggttaagatgctctacaatgggcag
ccggttgatttaactcctgaacaagaggaggtagcaacaatgtttgctgtgatgaaagac
acagagtatgcaaccaagcagacatttattgataacttcatgaatgactggagagtgata
cttggccggaatcacgtaattaagaaatttgagctctgtgatttcaccctgatctatgag
tggcatcagaaggagaaggacaagaaaaaacaaatgactacagaagagaaaaaggctttg
aaagaagaaaaattgaagcaagaagataagtacatgtgggctgttgttgacggcgtcaaa
gagaaggttggaaactttagagttgaaccacctggactctttcgtggccgtggggagcat
cccaagatggggaaactgaaaagacgaatccgcccaagtgatattacaataaacattgga
aagggtgcttcaattccagaatgtccaatccctggtgaaaggtggaaagaaataaagcac
gacaatactgtcacatggttggcattttggaatgatccaatcaattcaaaagaaagcaag
tatgtttttcttgcagctagcagttcccttaaagggcaaagcgacaaggagaaatatgag
aaggcaaggatgttgaagaattacattgatgacattagatcaacatacacaaaggatttt
gggagtaaagacatcagcaagcggcaaatagcagttgctacctaccttattgataagcta
gctcttagggcaggcaatgaaaaggatgatgatgaggctgatacagttggttgctgcact
cttaaagtcgaaaatgtcacactacttcctccaaataagttacagttcgacttccttggt
aaagattccatcagatatttcaacacagttgaagtggaacttcccgtgtataaagctatt
tcacagtttcaaactggaaaaaaggatggtgatgatctttttgacaagctggatacgagc
aaactcaatgctcatctgaaggaactgatgcctggcctcacagccaaagtcttccgtaca
tacaatgcttctatcaccttggatgacatgttgaacaaagaaacaaaagatggcaatgtt
gcagagaagattgctgtgtatcagcatgcaaacaaagaggttgcaatcatatgcaatcat
caacgtagtgtctctaagtcccacactgcacaaatgtcaagattgagtgagaagatggcg
gagctgaagagtgtgctagaggaactgaaagtggatttgagtcgggcaaagaaagggaag
cccccactgagagatgcagatgggaagacaaagaagaacttgtcaccagaagcgatagag
aagaagattgctcagaccaatgtgaagatagagaagatggaacttgatatgaagatcaaa
gaggacctgaagaccgtagcattgggcacatcaaaaatcaactatcttgaccctaggata
tcagtcgcatggtgcaagcgccatgaagttcccattgagaagattttcaacaagtccctt
cttgcaaagtttgcttgggcaatggatgtcgaacccacattcagattctga
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