Magnolia sinica: 131219250
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Entry
131219250 CDS
T09699
Name
(RefSeq) SWI/SNF complex subunit SWI3B
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
msin
Magnolia sinica
Pathway
msin03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
131219250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msin03021
]
131219250
03036 Chromosome and associated proteins [BR:
msin03036
]
131219250
Transcription machinery [BR:
msin03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
131219250
Chromosome and associated proteins [BR:
msin03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
131219250
PBAF complex
131219250
GBAF(ncBAF) complex
131219250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
SWIRM-assoc_1
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
131219250
NCBI-ProteinID:
XP_058070284
LinkDB
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Position
1:135551784..135558466
Genome browser
AA seq
495 aa
AA seq
DB search
MAASPPPPPHEETAPTTSSENPPELAPPLALNSENQATDSKELTPLPPEPSVQIITIPSY
SRWFSFHKIHETERRLLPEFFDSRTPPSKNPRVYKYYRDSIVRRFRENPLRKLTYTEVRR
TLVGDVGSIRRVFDFLEGWGLINYTRATALKLKGEEKESKLGVGTPSPAAAVDSHLEKKE
SAKKVCGGCKTVCSQVCFACDKVDLILCSRCFVRGNYRVGLNSGDFKRVAINEEAKTDWT
EKETLHLLEAVLQYGDDWKKVAEHVGSKEEKECVSRFIKLPFGEQFLGPPDIDEVDKYYQ
IKDQTDSGTGVENSSVSSPAKRRCLTPLADASNPIMGQAAFLSAVVGSEVAEAAAQAAVA
ALSEVGLTDGHNESRENFESLAKETDHQEAVAANGHTEARVLEQAGLDAWALLEKEEQDV
ERSISDIIEVQMKEIQEKIVHFEGLDMQMEKEWLQLQHMKDLLFADQLTILQHRAPLRFG
ESGEKDKVKSTDAVT
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggcagcttccccaccaccacctccacacgaagaaaccgctccaaccacctcgtccgaa
aacccgccagaactcgctcccccactcgccctaaactcggaaaatcaggccaccgattca
aaggaactcactcctctgccaccagagccctccgtccaaatcatcacaatcccaagctac
tcgaggtggttttcattccacaagatccatgagacggaacgccggctccttccagaattc
ttcgactcgagaaccccaccttcgaaaaaccctagggtttataagtactacagggattcc
atagttcggcggttcagggagaatccgttgaggaagctcacgtatacagaggtgcggcgg
actctcgttggggatgtcggatcgatccggagggtctttgatttcctcgagggatggggc
ttgatcaattacacaagggccacggccttgaagctgaaaggagaagagaaggagagtaag
ctgggcgttggtacgccgtcgcctgcagcagcagtggactctcatctggagaagaaagag
agcgcaaagaaggtgtgcggcggttgcaagactgtttgcagccaggtttgcttcgcctgt
gataaggttgacctgattctttgttcaaggtgctttgttcgtggcaactaccgggttggc
ctcaattctggagactttaaaagagttgccatcaatgaagaagcaaagacagactggacc
gagaaagagactctgcacctcctagaagccgttttgcagtatggtgatgactggaaaaag
gtagcagagcatgtcggtagcaaagaagagaaagagtgtgtttcacggttcatcaagctc
ccttttggagagcagttcttgggacctccagacattgatgaggttgataagtattatcag
ataaaggatcagactgactctggaactggagtagagaattccagtgtttcatcccctgct
aagagaaggtgtctcacaccccttgctgatgcaagcaacccaattatgggtcaggctgct
ttcttatcagctgtggtgggctctgaagttgcagaagctgcagcccaagccgctgtggca
gctctttcagaggtaggcctcactgatggtcacaatgagagcagagaaaattttgaatct
ctggccaaagaaacagatcatcaagaagctgtcgctgcgaatggtcacactgaagcgagg
gtcctggagcaggcaggcttagatgcgtgggctctgcttgagaaagaagagcaggatgtg
gagcgatccatctccgatatcatcgaggttcagatgaaggaaatccaggagaagattgtc
catttcgagggcttggatatgcaaatggagaaagagtggctgcagctacaacacatgaaa
gacctactttttgctgatcagttaaccattctgcaacacagagctccattgaggtttggg
gagagtggagagaaggacaaggtcaaatcaacagatgctgttacctga
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integrated database retrieval system
