Magnolia sinica: 131219255
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Entry
131219255 CDS
T09699
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 36
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msin03009
]
131219255
Enzymes [BR:
msin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
131219255
Ribosome biogenesis [BR:
msin03009
]
Eukaryotic type
90S particles
Helicases
131219255
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
131219255
NCBI-ProteinID:
XP_058070287
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All DBs
Position
11:65464139..65493062
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AA seq
478 aa
AA seq
DB search
MGDTETLIQPDFPLFSKKITPKPSLPKTPTTQNPNTTRKPTQTDSDSLGFSELGLSEWAI
QTCTELGMKKPTPVQRHCIPHILAGEDVLGLAQTGSGKTAAFALPILHRLAQDPYGVFAL
VVTPTRELAYQLAEQFRALGSCLHLRCSVIVGGMDMISQAQALAQRPHVVIATPGRLKVL
LEDDPDVPAVFSRTKFLVLDEADRVLDVGFEEELKVVFQCLPKNRQTLLFSATMTDDLQD
LLQLSANKAYFYEAYEGFKTVESLKQQYAFIPKNVKDVYLFHILSKMEDEGIRSAIVFVA
TCRSCHLLSLLLEELDQPAAALHSHKSQSLRLAALNRFKSGQVPILLATDVASRGLDIPT
VDLVVNYDIPRYPRDYVHRVGRTARAGRGGLAVSFVTQNDVDLIHEVEAVIGKQLDEFEC
KENEVLADITKVYKAKRVASMKMIDDGYEETAKARKAQKLKKLAENGSQKRRRKRQKS
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgggagacacagaaaccctaatccaaccagacttccctctcttctccaaaaaaatcacc
ccaaaaccctctcttcccaaaacacccaccacccaaaatcccaacaccaccagaaaaccc
acccaaaccgattccgactcgctaggtttttcagaactcggtctctccgaatgggcgatc
cagacctgtaccgaactcggcatgaagaagcccactcctgttcaacgccactgcatccct
cacatcctcgccggcgaggatgtccttggccttgcccagaccggcagtggcaagactgcc
gcattcgccctcccaatccttcaccgcctcgcccaggacccgtacggcgtctttgcgctg
gtggtgacaccgacaagggagttggcataccagctggccgagcagttccgtgctctaggc
tcgtgcctgcatcttcgatgctctgttattgtcggtgggatggacatgatcagccaggcg
caggccctggcgcagcgtccacatgttgtaattgcaacgcccgggaggctcaaagtgctc
cttgaggacgatccagatgttccagccgtcttctccaggaccaagtttctagttttggat
gaggcagacagggttttggatgttggttttgaggaagaactaaaagtggtctttcagtgc
ttacccaaaaatcgacagacccttctgttttcagcaactatgacagatgatctacaagat
ttgcttcagctttctgcaaataaggcttacttctatgaggcatatgagggcttcaagact
gttgaatctctcaaacaacagtatgcttttattccaaaaaatgtgaaggatgtttatctc
tttcacattctatcaaaaatggaggatgagggtattcgctctgccattgtatttgttgct
acttgcaggagttgccatcttttgagcttgttgttggaagagcttgatcagccagctgcg
gcactgcattctcacaagtcccagtctctcaggcttgctgcactaaatcgattcaaatct
ggtcaagttcctatcttgcttgcaacagatgttgccagccgtggtttagatattccaaca
gttgatcttgttgtgaactatgatattccgaggtatccacgggattatgttcatcgtgtg
ggccgtactgcaagagctggcagaggagggctggccgtgagctttgttacacagaatgat
gtggatctcattcacgaagtagaggctgttattggaaaacaattagatgaatttgaatgc
aaggagaatgaggttcttgccgatatcacaaaggtttacaaggccaaacgcgttgcaagt
atgaagatgattgatgacggctatgaagagacagcaaaagcgaggaaagctcagaagctg
aaaaaattagcagagaacggctcacaaaagagaaggcgtaaaaggcagaaatcatag
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