Magnolia sinica: 131219330
Help
Entry
131219330 CDS
T09699
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msin03400
]
131219330
Enzymes [BR:
msin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
131219330
DNA repair and recombination proteins [BR:
msin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
131219330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
DExH14_plug
ResIII
Helicase_C
AAA_30
AAA_19
DEXQc_Suv3
T2SSE
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
131219330
NCBI-ProteinID:
XP_058070394
LinkDB
All DBs
Position
11:complement(72148022..72296735)
Genome browser
AA seq
2079 aa
AA seq
DB search
MLLQLPRLSSSLRDPYDVDDAYLQRRIILQNHQSSQSSNNDLELAQKIVHQWEEASIDVR
QAYRQFLGAIVELINGEVVSEEFQEVAKIVYDLFSGLGTDYDGSESIAERKVELQRLLGY
SVSDASLQKVASLAQRLSALQSNDHETKLAMDRPVDGYVDNSSEFGTNLSFREPARFLLD
IPLENGVYLADENYETSISNDHESAYHHSAIDKENVNLRWLKNACDLIVRKGGSQLSGDE
LAMALCRVLESDKAGDEIAGDLLDLVGDSSFETVQDLLSHRKELVDAIRNGIFILKSEKT
TSIAQPRMPSYGTQVTIQTESERQIDKLRRKEEKRHKRGTEHAVEDDFHAASFSSLLQAS
ERKGLFDDLIGTGQGPLSVTALPQGTLRKHFKGYEEVRIPPTPTAQMKPGERLIEIKELD
DFAQAAFHGYKSLNRIQSRIYQTTYHTNENILVCAPTGAGKTNIAMIAVLHEIKQHFKDG
FLRKDEFKIVYVAPMKALAAEVTSTFSHRLAPLNLTVKELTGDMQLTKNELEVTQMIVTT
PEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVESTQTMIRIV
GLSATLPNYLEVANFLRVNPEAGLFFFDSSYRPVPLAQQYIGISEPNFVARNNLLNEICY
NKVADSLKQGHQAMVFVHSRKDTGKTAKTLIENSRKMEDVDLFKNETHPQYELLKREVQK
SRNRELVELFDSSIGIHHAGMLRSDRGLTERLFSQGILKVLVCTATLAWGVNLPAHTVVI
KGTQIYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIILTSHDKLAYYLRLLTSQLP
IESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMKSNPLAYGIGWDEVVSDPS
LVSKQRSLVVDAARALDKAKMMRFDEKSGNFYCTELGRIASHYYIQYSSVETYNEMLRRH
MNDSEVINMVAHSSEFENIPIRDEEQNELESLVRLSCPVDVKGGPSNKNGKVSILIQLYI
SRGSLDSFSLISDAAYISASLARIMRALFEICLRRGWCEMSSFMLNYCKAVDRQIWPFQH
PLRQFGKDLSSEILAKLEHSGADLDRLFEMHENEIGALIRYAHGGKLVKQYLGYFPRIDL
SAIVSPITRTVLKVDLLITPDFTWKDRFHGAALRWWILVEDTQNDHIYHTELFTLTKRMA
RGESQKLSFTVPIFEPHPPQYYIRAVSDSWLHAEAFHVISFHNLTLPETYMSHTELLDLK
PLPVTSLGNKAYQDLYKFSHFNPIQTQTFHVLYHTDSNVLLGAPTGSGKTISAELAMLHL
FNTQPDMKVIYIAPLKAIVRERMNDWRKRLVSMLGKKMVEMTGDFTPDLKALLSADIIIS
TPEKWDGISRNWHTRSYVMKVGLMILDEIHLLGADRGPILEVIVSRMRYISSQTERAIRF
VGLSTALANARDLADWLGVGETGLFNFKPSVRPVPLEVHIQGYPGKFYCPRMNSMNKPAY
AAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDEHPRQFLNMLEDDLEMILSQVTDQ
NLRHTLQFGIGLHHAGLNDRDRSLVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTE
YYDGKAKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFPVESN
LREQLHNHINAEIISRTIFRKEDAVHYLTWTYLFRRLVVNPAYYGLDDTDTNTLNSYLSS
LVQNTLEDLEDSGCIKMNEDTVEPLMLGSIASQYYLSYLTVSMFGSNIGPNTSLEVFLHI
LSGASEYDELPVRHNEENYNEALSKKVPYPVDQHNLDDPHVKANLLFQAHFSQVELPISD
YITDLKSVLDQSIRIIQAMIDISANSGWLSSTITCMHLLQMVMQGLWFGRDSPLWMLPCM
NDDLLSFLSGKGISNVQQLLGLSKMKLQKSLQNFSASQLYQDLQNFPHVQVTLKVHTEDK
GGTNSSVLDIRLEKLSSRSTTSRAFTPRFPKVKDEAWWLVLGNVTTSELYALKRLSFSDR
LVTQMTLPSESKNHEGMKLILVSDCYLGFDQEHSIAKFF
NT seq
6240 nt
NT seq
+upstream
nt +downstream
nt
atgctgttacaactgcctcgactgtcgagctctctgagggatccctacgacgtcgatgat
gcatatctccaacgcaggatcatcctccaaaatcaccaatcttcccaaagttcaaacaat
gatttggagctcgcacagaaaatagttcatcagtgggaagaagcctctatagatgtacgt
caagcatacagacaatttcttggggcaatagtagagttgattaatggtgaagtggtatca
gaagaatttcaagaagtggcaaaaattgtttatgatcttttcagtggtctgggaacagat
tacgatggaagtgaaagtattgctgagagaaaggtggaattgcagaggcttcttggttac
tctgtttcagatgctagtctgcagaaagttgcttcactagctcaaaggctttctgctttg
cagtctaatgaccatgaaactaagcttgccatggataggccagttgatggatatgttgat
aattcaagtgaatttggcaccaatctttctttccgagaaccggctcggtttcttttggac
ataccattggaaaatggagtatacctggccgatgaaaactatgagacttctatctccaat
gaccatgaatctgcatatcaccactcagctattgacaaggaaaatgtgaatttgagatgg
ttaaaaaatgcatgcgacctaatagtcaggaaaggtggctcgcagctttctggagatgaa
ttagcaatggctctttgtcgtgtgcttgaatcagacaaagcaggtgatgagatcgccggc
gatttattggatcttgttggagatagttcctttgaaacagtgcaggatctcttatcgcac
cgtaaggaacttgttgatgccatccgcaatgggatttttatactaaaatctgagaaaacg
acatcaattgctcaacctcgtatgcctagctatggaactcaggttaccattcaaacagaa
tctgaacggcaaattgataaacttcggcggaaggaggaaaagcgacataaacgtgggaca
gaacatgcagtcgaggatgattttcatgcagcaagtttttcttctttacttcaagctagt
gagagaaaaggcctcttcgatgatctgattgggactggccaagggcctctatctgttact
gctcttcctcaaggaactctaaggaagcattttaagggatatgaagaagtcagaatcccc
cccacaccaacagcccaaatgaagcctggggagagactgatagagataaaagagttagat
gactttgctcaggctgccttccatggctacaaatcccttaaccgcattcagagccgcata
tatcaaactacatatcacacgaacgagaatatactagtttgtgcaccaactggagctggc
aagacaaacattgctatgattgctgttctgcatgagatcaaacaacactttaaggatggt
ttcttgcgtaaagatgaatttaaaattgtctatgtcgctcctatgaaggcactggctgca
gaggttacatcaacatttagtcatcgtcttgcccctttgaatttgactgtgaaagaactt
acaggagatatgcaacttaccaaaaatgaactagaagtgactcagatgatagtaacaaca
cctgagaaatgggatgtcataactcgaaaaagcagtgacatgtcgctttctatgttggtg
aagcttttaattattgatgaagtacacttactgaatgatgatagaggtcctgtaatagag
gcattagttgctcgcaccctccgtcaggttgagtcaacacagactatgatacgcattgtg
ggtctctcagctacgctgcccaattatttggaggtggcgaactttttgagggtgaatcct
gaagcaggcttgttcttttttgactctagctaccgtccagtgcctcttgcacagcagtat
attgggatctctgagccgaactttgttgctcgtaacaacttattgaatgagatttgctat
aataaggtcgcagattcactaaagcaagggcatcaggcaatggttttcgttcattcacga
aaagacacaggaaaaacagcaaaaacactgattgaaaattcgcgaaaaatggaagatgtg
gatttatttaagaatgagacacatccacagtatgagctgctaaagagggaggtacaaaag
tccagaaacagagaacttgttgagttatttgattcttccattggtattcaccatgctggg
atgttacgttctgatagaggcctgacggaacgccttttctcccagggcatcctcaaagtc
cttgtatgcactgcaactttggcatggggagtaaacctacctgctcacacagttgtcata
aagggtactcaaatatatgatccaaaggctggtggatggcgagatctgggcatgcttgat
gttatgcagatctttggacgtgctggaagaccacagtttgacaaaagcggtgaaggaatt
atcttaacatctcatgacaagctggcctactatttaagattactgacgagtcaactcccc
atagagagtcagtttatcagctccttgaaagacaatttgaatgcagaagtggccttggga
acggtaacaaatgttaaagaagcttgtgcttggcttggatatacttatctattcataagg
atgaagtctaatcccctagcgtatgggataggatgggatgaggttgttagtgatccttca
ctggtttcaaagcaaaggtctctcgtagtagatgctgcacgtgctcttgacaaggcaaaa
atgatgcggtttgatgaaaaaagtggcaatttttattgtacagagcttggtcgaattgct
agtcattattatattcaatattctagtgtagaaacttacaatgaaatgcttaggcgccac
atgaatgacagtgaggtaattaacatggtagcccactcatctgaatttgaaaatattcct
attagagatgaggagcagaatgagctagaaagcttggttcgcttatcatgccctgtagat
gtcaaaggtggccccagcaataaaaatggaaaagtttcaatccttattcagttgtacatt
tcacgaggctcgctagacagtttttctttaatctctgatgcagcatacattagtgcaagc
ctggcccgtatcatgcgtgctttatttgaaatttgtttgcgcagaggatggtgtgaaatg
tcttctttcatgttgaactattgtaaggcagtagatcgccaaatatggcctttccaacat
cctctcagacagtttggcaaagatctttcatcagaaatattggctaaacttgaacacagt
ggggctgacttagaccgcctcttcgagatgcatgagaatgaaattggagccctcattcgt
tatgctcatggtggaaagttggtcaagcaatatttgggatattttccacggattgacttg
tctgcaattgtgagtcctatcaccagaactgttctcaaggttgatttgctcataacacct
gactttacttggaaagatcgctttcatggtgctgccctacgttggtggattctagttgag
gatacccagaatgaccacatataccatacagagctcttcacgttgacaaagcggatggca
aggggagaatctcaaaaactttcatttactgtaccaatatttgaaccacatccaccccag
tactacatccgtgctgtttctgattcttggttgcatgcagaggcctttcatgtgatttct
ttccataatctcaccttaccagagacttatatgtcgcacaccgaacttcttgatttgaaa
cctcttcctgtgacatcgctgggaaacaaggcctatcaggacttgtataagttttcacac
ttcaatcccattcaaacacagactttccatgtgttatatcacacagacagcaatgttctt
ttaggagctccaacaggaagtggaaaaaccatatctgcagaacttgcaatgcttcatctc
ttcaacactcagcctgatatgaaggtcatttatattgcacctttgaaggccattgttaga
gagagaatgaatgactggagaaagaggctggtttctatgcttggaaagaagatggttgag
atgactggggatttcactccagatctaaaggcgctgttgtccgcagatatcataatctcc
actcctgaaaagtgggatggtatcagccgtaattggcatacccgaagctatgtcatgaag
gtagggcttatgattttggatgaaattcacttacttggagctgatcgtggtcccattctt
gaggtgatcgtctctcgaatgaggtatatatcatcacaaacggagcgtgcaatacggttt
gttggcctttcaacagccttagcaaatgctcgtgatttggctgactggttgggtgttggg
gagactgggctcttcaatttcaagcctagcgtgaggcctgtaccccttgaagttcacatc
cagggatacccggggaaattctactgtcccagaatgaatagcatgaataaacctgcatat
gcagccatatgtacccattctcctacaaaaccagttcttatatttgtttcatctcgtcgc
caaacaagacttactgcacttgacctcattcagtttgcggcctcagatgaacatccaagg
cagttcctgaatatgctggaggatgatttggaaatgatcctgtctcaggtcactgatcag
aacctgaggcacactttacaatttggcattggattgcaccatgcaggattgaatgatcga
gatagatctttggttgaggagcttttcgcaaataataaaattcaggtcttggtatgtacc
agcacattagcatggggtgtaaatcttccagctcatctggtcatcattaagggaacagaa
tattatgatggtaaagcaaaaagatatgttgattttcccattacagatatcttgcaaatg
atgggtcgtgcaggtcgaccacaatatgaccaacatggaaaagcagttattcttgtccat
gaacccaaaaagagcttctataagaagtttctttatgaaccattcccagttgaaagtaat
ctgagggagcagttgcacaaccatatcaatgctgagattatttctcgcacaattttccgt
aaagaggatgcagtgcattatcttacatggacttacttgtttcgtcgattggttgttaat
ccagcctactatggattggacgatactgacacaaacactttaaattcatacttgtcaagt
ttagtgcaaaatacattagaagatctggaagatagtggatgcatcaagatgaatgaagac
actgtggagcctttgatgctgggttcaatagcatcccagtactaccttagctacttgaca
gtatcaatgtttggatcaaatataggcccaaatacttcacttgaagtttttctgcacatt
ctttctggtgcttcagagtatgatgagctccctgttcggcataatgaggaaaattacaac
gaagccttatccaaaaaagttccatatccagtggatcagcataatcttgatgacccacat
gtgaaagcaaatttactcttccaggcacacttttcacaagtagaattaccaattagtgac
tatatcactgacctaaaatcagtactggatcaaagcattcgtatcatccaggctatgata
gacatatctgctaatagtggatggctttcaagcacaataacttgtatgcatcttctacaa
atggtcatgcagggtttgtggtttggtagagattcacccttgtggatgttgccgtgcatg
aacgatgatctcctaagtttcctgagtggaaaaggcatctcaaatgtgcaacagctattg
ggtctctcaaagatgaagctccagaagtcactacagaatttctctgcttcacaattatac
caggatctgcagaattttccccatgttcaagtaactttaaaagtccacacagaagataag
ggagggacgaattcgtctgttcttgacattagattggaaaaactgagctctcggagcaca
acatcgagagccttcactcctcggttcccaaaggtaaaagatgaagcatggtggttggtg
cttggaaatgtcaccacctcagaactatatgctttgaaacgactgagtttctcggaccgt
ttggttactcaaatgacgttaccctcggaatcaaaaaatcacgaggggatgaagcttatt
ctcgtttctgactgttatcttggatttgaccaagagcactccattgcaaaattcttttga
DBGET
integrated database retrieval system
