KEGG   Magnolia sinica: 131219513
Entry
131219513         CDS       T09699                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 12
  KO
K03009  DNA-directed RNA polymerases I, II, and III subunit RPABC4
Organism
msin  Magnolia sinica
Pathway
msin03020  RNA polymerase
msin03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:msin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    131219513
  09124 Replication and repair
   03420 Nucleotide excision repair
    131219513
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:msin03021]
    131219513
   03400 DNA repair and recombination proteins [BR:msin03400]
    131219513
Transcription machinery [BR:msin03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     131219513
  RNA polymerase III system
   RNA polymerase III
     131219513
  RNA polymerase I system
   RNA polymerase I
     131219513
DNA repair and recombination proteins [BR:msin03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      131219513
Motif
Pfam: DNA_RNApol_7kD YjdM_Zn_Ribbon DUF5816 zinc_ribbon_13 OrfB_Zn_ribbon DZR HypA zf-ribbon_3 A2L_zn_ribbon DUF1451 Zn-ribbon_8
Other DBs
NCBI-GeneID: 131219513
NCBI-ProteinID: XP_058070668
LinkDB
Position
11:complement(82236863..82250767)
AA seq 51 aa
MDPQPEPVSYICGDCGTENTLKPGDVIQCRECGYRILYKKRTRRIVQYEAR
NT seq 156 nt   +upstreamnt  +downstreamnt
atggatccgcagcccgaaccagtgagctacatctgtggcgattgtggaacggagaacaca
ttgaagccaggtgatgtgattcaatgtcgtgaatgcggttaccgcatcttgtacaaaaag
cgcactcgcagaattgttcaatatgaagcacgctga

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