Magnolia sinica: 131219578
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Entry
131219578 CDS
T09699
Name
(RefSeq) tRNase Z TRZ2, chloroplastic-like
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msin03016
]
131219578
Enzymes [BR:
msin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
131219578
Transfer RNA biogenesis [BR:
msin03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
131219578
Prokaryotic type
131219578
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
PDEase_II
Motif
Other DBs
NCBI-GeneID:
131219578
NCBI-ProteinID:
XP_058070785
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Position
11:complement(84262041..84269898)
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AA seq
354 aa
AA seq
DB search
MQTSLSNSPRSHFPPFLLPPSPSIQRDGRNLSIRRSSSSGSVSALKKSGFLTAIDRAIEE
EESYRKARAEINRRGVDVEGYLIEGLSIGGHETCVIIPSLNAAFDIGRCPSRAVHQDFLF
ITHAHLDHIGGLPMYLATRGLYSLKPPTVFVPPCIKGDVEKLLDIQRAMSQTELKLDLVA
LDVGETYEIRNDLVVRPFKTHHVIPSQGYVIYSVRNKLKKQYAHLPGTKIKKLKLSGVEI
TDTILSPEVAFTGDTTSDFILEPRNADALRAKILITEATFLDEELGIEHARQHGHMHLYE
ILEHAQWIRNKAVLLTHFSSRYKIEDIRQAVSKLQEKLSSKVVALTEGFKLTYS
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgcagacatctctctccaattctcctcgctcccatttccctccttttctcctccctcca
tctccttccatccaacgcgacggacggaatctctccatccgtcgcagcagcagcagcggc
agcgtgtcggctctgaagaagtcgggattcctgacggccatcgatcgagccattgaggaa
gaggagtcgtacaggaaagcaagggcggagattaaccgaaggggcgtcgacgtcgaaggc
tacctgatcgaagggctctcaatcggcggccatgagacgtgcgtcatcatccccagcctc
aacgccgccttcgatatcggaaggtgcccctctagggccgtccatcaggacttcctcttc
atcacccacgcccatctcgatcacattggagggcttccgatgtatttagcaactcgtggc
ctgtacagcttaaaacctcctacagtttttgtgccaccatgcatcaaaggggatgtggag
aagctattagatatacagagggctatgagtcagacagagctgaaacttgatttagttgcg
ctggatgtaggggaaacctatgaaatacggaatgatcttgttgtaagacccttcaaaacg
caccatgtcattccaagccagggatatgttatttactcagtgagaaacaagctgaagaaa
cagtatgctcatttgccaggaaccaagatcaagaaattgaagctttctggtgttgagatt
acagacactatattgtctccagaggtggcctttacaggcgacacaacatctgattttata
ctcgagccacggaatgcagatgccctgagagcaaagattcttataactgaggcaactttc
ctagatgaagaattgggaatcgagcatgcacggcagcatggtcatatgcatctgtatgag
atcctggaacatgctcagtggatccgcaacaaagctgttctactcacacatttctcgtcc
cggtacaagatcgaggatatccgtcaagctgtgtcaaagctacaagagaagctgtcgtcg
aaggtggttgctcttacagaaggcttcaaattgacgtactcataa
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