KEGG   Magnolia sinica: 131220055
Entry
131220055         CDS       T09699                                 
Name
(RefSeq) uncharacterized protein LOC131220055
  KO
K02327  DNA polymerase delta subunit 1 [EC:2.7.7.7]
Organism
msin  Magnolia sinica
Pathway
msin03030  DNA replication
msin03410  Base excision repair
msin03420  Nucleotide excision repair
msin03430  Mismatch repair
msin03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:msin00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    131220055
   03410 Base excision repair
    131220055
   03420 Nucleotide excision repair
    131220055
   03430 Mismatch repair
    131220055
   03440 Homologous recombination
    131220055
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:msin03032]
    131220055
   03400 DNA repair and recombination proteins [BR:msin03400]
    131220055
Enzymes [BR:msin01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     131220055
DNA replication proteins [BR:msin03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    131220055
DNA repair and recombination proteins [BR:msin03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      131220055
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     131220055
SSDB
Motif
Pfam: DNA_pol_B Retrotrans_gag
Other DBs
NCBI-GeneID: 131220055
NCBI-ProteinID: XP_058071013
LinkDB
Position
12:50501641..50580401
AA seq 283 aa
MISNQYLFKQIGCHSYLCSYSKMHFYFLLLHALIFCLCGCHEKRDAATAPNVGDRVLYVI
IKAAKGAKAYERSEDPIFVLENNIPIDSHYYLENQISKPLLRIFDPILKNAEKELLHGSH
TRSVSISIPSNSGIMKFAKKQLCCIGCKALIRKTLQPVIAEFSGKSNLPHASAIAQEFRQ
HDPPRFISDPDPSVAEAWRTEIQRAIEFETLVQGDLTISQYEARFLALSIFAPHLASDKK
MRARRFVTGLHPALHSRVVGHCLETFDEVVHRALVYKEDWAMT
NT seq 852 nt   +upstreamnt  +downstreamnt
atgatttcgaatcagtatttatttaaacaaattggatgtcattcctatctttgttcttac
agcaagatgcatttttattttcttttattgcatgctcttattttctgcttgtgtggttgt
catgaaaagcgggatgctgccactgctccaaatgttggggatcgtgttctgtatgttatt
attaaagctgcaaaaggtgccaaggcttatgaaaggtcggaggatcctatcttcgtgcta
gagaataacattccaattgattcccattactatctcgaaaatcaaattagcaagccgctt
ttgagaatatttgatcccattctgaagaatgcggaaaaggaacttctccatggcagccac
acaagatcagtttccatttcaattccttcaaacagcggtatcatgaaatttgctaagaaa
caactttgttgcattggctgcaaagctctaatcagaaagacccttcagcctgttattgcc
gagttttctgggaagtctaacttaccacatgcgagcgcgatagctcaagagttccggcag
catgatcccccgaggtttatcagtgatcctgacccttctgtcgctgaggcttggcgcact
gagatccagagggcgatcgagtttgagaccctggttcagggagatttgaccatatctcag
tatgaggcccgtttcttggctttgtctatatttgctcctcacctcgccagcgataagaag
atgagggcccgtcgttttgtgactggtttgcatcctgcccttcacagccgtgtagtaggg
cattgcttggagacgtttgacgaggttgtgcatcgggcactagtttataaagaggactgg
gctatgacctag

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