Magnolia sinica: 131220725
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Entry
131220725 CDS
T09699
Name
(RefSeq) KH domain-containing protein At4g18375-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msin03019
]
131220725
Messenger RNA biogenesis [BR:
msin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
131220725
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
TrcR
Motif
Other DBs
NCBI-GeneID:
131220725
NCBI-ProteinID:
XP_058071516
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All DBs
Position
12:603113..608442
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AA seq
623 aa
AA seq
DB search
MGETGKRSRRDNDGDDKYQKKRFNGKDNSGDGEVVIYRILCPNGVIGNVIGKSGKVINSL
RQETRSKIKVVDPFPGSDERVILIYCYVKEKDEKDVDEDDMKPLCAAQDALLKVHAAIAN
AVAAVGESDKKHKEEAHILVPSSQVANVIGKSGSTIKKLRTNTKTNIKVNPKDPNDPTHA
CAMSFDNFVQISGEAGAVKQALYAVSAIMYKFSPREEIPLDTTVPDLPPSIIIPADLPIY
PTGGFYPGADSMVPPPRSVPQVAPTSHVPELHAYADGGSPWPMYSSSLPVASGYGGSSRS
EELTVRVLCPSDKIGRVIGKGGNSIKSVRQASGARVEVGDPKGDCDECVITVTSTESTDD
VKSTAVEAVLLLQGKINDNDDDDTVNIRILVPSKTIGCLIGKSGAIINEMRKSTKADVRI
SKHEKPRCAEEGDELVEVIGEVGCMRDALVQIVLRLRDYVLKDREGARSAPGADSLYSGN
LSAPSVLPSIPPVAPLGYDRRVDTGSGLGMLSTSSLYGYGSGYGSGYGSSQGGENGYGLI
SPYSSKSYSGLPSTLEIVIPANAVGKVMGKGGANLANIRKISGAIVEVLDSKSSRSERIA
QISGTPEQKRAAENLIQAFIMST
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgggcgagacaggcaagcgatcccggagggataatgatggtgatgacaaataccaaaag
aaaagattcaacggaaaagacaattcgggtgatggggaggtggttatctatcgcatactt
tgcccgaatggggttatcggaaacgtgattggtaagagcggtaaggtgataaattctctt
aggcaagagacccgctcgaagattaaggttgttgatccttttcctgggtcggatgagagg
gttatattgatatattgttatgtcaaggagaaggatgagaaggatgtcgatgaggatgat
atgaagcctctttgtgctgctcaggatgctcttctcaaagtacatgctgctatagctaat
gcggtcgctgctgttggggagtctgacaagaaacataaagaggaggcccatattctcgtc
ccaagtagccaagtggcgaatgtgattgggaaatcaggtagcactatcaagaaactgaga
accaatacgaagacgaatatcaaggttaacccgaaggatcccaatgaccctactcacgca
tgcgcaatgagctttgacaatttcgttcagataagtggtgaggctggagcagtgaagcag
gcattgtatgcagtatctgcaatcatgtacaagttctccccaagagaagagattcctctt
gacactactgtaccagatcttccaccaagcataatcattccggcagatctccctatttat
cctactggtggcttttatcctggggcagattctatggtcccacctcctagatctgtgcca
caagtggcaccgacatctcatgtaccagaactccatgcatatgctgatggtgggagtcca
tggcctatgtattcatcttccctccctgttgcttctgggtatggtggctcatctcgatca
gaagagctaacagtacgagttctatgcccctctgacaagattgggcgcgttattggcaag
ggagggaattccattaaaagtgtgaggcaagcaagcggtgctcgtgttgaggttggagat
ccaaaaggggattgtgatgagtgtgttatcactgtcacgtccacagagtctacggatgat
gtgaagtctactgctgttgaagctgttctactgctgcaaggaaagatcaatgacaatgat
gatgatgacactgtcaacattcgcattcttgttccatccaagactattggctgtctcatt
ggcaagagcggtgctatcataaatgagatgcgcaagagtacaaaagctgatgttcgcatc
tcaaaacatgaaaagccaagatgtgctgaagagggtgatgaactagtggaggtgattgga
gaagttggttgtatgagagatgcacttgttcagattgttttgaggcttagagattatgtt
ttaaaagacagggaaggtgctcgcagtgctcctggtgctgattccctgtactcaggcaat
ctctctgcgccatcagttctgcctagcattcctccagttgctcccttgggttacgatcgg
agggttgacactggaagtggcttgggcatgctttctaccagcagcttgtatggatatgga
tctggctatggatctggctatggatcttcgcagggtggggagaatggatatggattgatt
tccccatattcatcaaagtcatattcaggattgccctccacccttgagattgtaatccct
gcaaatgcagtgggtaaagtgatggggaaaggtggagcaaacttggcaaatattcggaag
atctctggagctattgtggaggttcttgactcaaaatcatcccgttcggaacgcattgcc
cagatttcaggcacacctgagcagaagcgtgcagctgagaacctaattcaggccttcatc
atgtccacctaa
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