Magnolia sinica: 131220980
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Entry
131220980 CDS
T09699
Name
(RefSeq) 25.3 kDa vesicle transport protein SEC22-1-like isoform X1
KO
K08517
vesicle transport protein SEC22
Organism
msin
Magnolia sinica
Pathway
msin04130
SNARE interactions in vesicular transport
msin04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
131220980
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
131220980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msin04131
]
131220980
Membrane trafficking [BR:
msin04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Sec22
131220980
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Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
FtsK_alpha
Motif
Other DBs
NCBI-GeneID:
131220980
NCBI-ProteinID:
XP_058072005
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All DBs
Position
12:complement(14992802..15015764)
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AA seq
257 aa
AA seq
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MDSAKTLASSLLSDCVDFRVFLLSICRGNLRNFTCCRVKMVKLTMIARVTDGLPLAEGLD
DGRDQKDAEFYKQQAKSLFKNLSKGHIESSRMSIETGPYVFHYIIEGRVCYLTMCDRSYP
KKLAFQYLEDLKNEFEKVNGSQIETAARPYAFIKFDTFIQKTKKLYLDTRTQRNLAKLND
ELYEVHQIMTRNIQEVLGVGEKLDQVSQLSSRLTSESRIYADKAKDLNRQAFIRKWAPVA
IVLGVVFLLFWVRKKIW
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggattctgctaaaaccctagcttcttctcttctttcagattgtgttgattttagggta
tttcttttgtcgatctgtcgcggaaatcttcgcaattttacttgctgcagggtaaagatg
gtgaagctgacaatgatagctcgggttactgatggccttccattagctgaaggactggat
gatggtcgtgatcagaaagatgctgaattctacaaacaacaggctaaatctttgttcaag
aatctttcgaagggccacattgagtcatcaagaatgtcgatcgaaaccggtccttacgtc
ttccactatattattgaaggccgtgtatgttatttaaccatgtgtgatcgttcttatccg
aagaaacttgcttttcaatacctagaagacctcaaaaacgaatttgagaaagtcaacgga
agtcaaatagaaactgctgccaggccctatgcttttattaaatttgatacattcatacag
aagaccaagaaattatacttggacactcgtactcagcggaaccttgcaaagttaaatgat
gaactttatgaagtccaccaaatcatgactcgcaatatacaagaagttcttggtgtcggt
gaaaaattggatcaggtcagccaactgtcaagccgattgacatctgaatctcgcatctat
gccgataaggcaaaagatctaaatcgacaggcattcattcggaagtgggcacctgttgcc
attgtgcttggtgttgtcttccttcttttctgggttagaaagaagatatggtga
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