Magnolia sinica: 131221014
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Entry
131221014 CDS
T09699
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha-like isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
msin
Magnolia sinica
Pathway
msin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131221014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msin03019
]
131221014
03110 Chaperones and folding catalysts [BR:
msin03110
]
131221014
03029 Mitochondrial biogenesis [BR:
msin03029
]
131221014
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msin04147
]
131221014
Enzymes [BR:
msin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
131221014
Messenger RNA biogenesis [BR:
msin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
131221014
Chaperones and folding catalysts [BR:
msin03110
]
Heat shock proteins
HSP60 / Chaperonin
131221014
Mitochondrial biogenesis [BR:
msin03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
131221014
Exosome [BR:
msin04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
131221014
Exosomal proteins of other body fluids (saliva and urine)
131221014
Exosomal proteins of breast cancer cells
131221014
Exosomal proteins of colorectal cancer cells
131221014
Exosomal proteins of bladder cancer cells
131221014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
131221014
NCBI-ProteinID:
XP_058072059
LinkDB
All DBs
Position
12:complement(16415513..16431608)
Genome browser
AA seq
577 aa
AA seq
DB search
MLSATGLSPFFTSRHETKRVLKSSRNLQIGRVFTVRAGPKKISFDGECRKSLQAGIDKLA
DAVSVTLGPKGRNVVLDGPDIPKVINDGVTIARSIELSDAIENAGAMLIQEVALKTNDLA
GDGTTTAIILAREMVKLGLLAVASGANPVSLKKGIDKTAHELVKVLKTRCRPVKGREDIK
AVASISAGNDDFVGNLIAEAIDKIGPDGVITIESSKTFETTIEVEEGMKIDKGYVSPQFI
TNQDKSIVEFQNAKVLVTDQKISNIKHILPLLEKTTQLSVPLLIIAEDISREVLATLVMN
KLSGVLNVAAIGCPGFGDGKKALLQDIALMTGADFIAGDLGLTLESATSDQLGIAQKITI
TNNSTTIVADSTTRAEIRARISQIKKDLAETDSAYQSRKLSERIAKLSGGVAVIKVGAPT
ETELEDRKLRIEDAKSATFAAIDEGIAPGGGATFVHLSKHIPVIKDLMEDPEEQIGADIV
RKALLVPASLIAVNAGVEGSIVVEKLLACDWEIGYNAMTDVYEDLMNAGVIDPCRVLRCA
LQNAASIAGVILMTQAVLVEKTKQPKPAVPYVPGITP
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgctcagcgccaccggactctctccgttcttcactagccgccatgaaaccaaaagggtg
ctcaaatcctcaagaaatctccagattggtagggtttttactgtcagagctgggcccaag
aagatttctttcgatggagaatgcaggaaatcattgcaagctggtatagataagcttgct
gatgccgtgtctgtaaccttaggacccaaaggtcgtaacgttgttctagatggacctgac
ataccaaaagtaattaatgatggagtgacaattgctcggtccattgagctctccgatgcc
attgagaatgcaggggcaatgctcattcaagaggttgcacttaagacaaatgatttagca
ggcgatgggactactacggcaatcattttggctcgcgagatggttaagttagggttatta
gctgttgcttctggggctaatccagtttctttgaagaaaggcattgataaaactgctcat
gagctggttaaggtcctaaagactagatgtagacctgttaaagggagggaggatataaaa
gctgtggcctcaatttctgctggaaatgatgatttcgttggaaatttgattgcggaagcc
atagataagattggccctgacggagtcatcacaatcgaatcatccaaaactttcgaaact
actattgaagttgaagaaggaatgaagattgacaagggctatgtatctccccaattcatc
acaaaccaggataaatcgattgtggagtttcagaatgctaaagttctagtaaccgaccaa
aagatttcaaacattaaacacatccttcctctattagaaaagacaactcagttaagcgtc
ccgctgttgataattgccgaagacatctcacgggaagtgctggcgacgctggtcatgaac
aagctgagcggcgtacttaatgttgcagctattgggtgtccgggatttggtgacggaaag
aaggctcttctgcaagatattgctcttatgacaggtgcagattttatagcgggtgatctg
ggcttgacgcttgaaagcgcaacatcagaccagcttggtattgctcaaaagattactata
acaaacaattcaacgaccatcgtcgctgactccactactagagctgagattcgagcaagg
atctcacagataaagaaagatctggctgaaacagacagcgcataccagtcaaggaagctc
tctgagaggattgcaaaactctctggtggtgttgctgtaatcaaggtaggagcgcccact
gagaccgaactcgaagataggaagctcagaatcgaggacgcgaagagtgctacttttgct
gccattgatgaaggtatagcaccaggtggtggggcgacattcgtacatctgtcgaagcat
attccagtcataaaggatctgatggaagatccagaagagcagattggtgctgacatagtc
aggaaggcactgcttgtacctgcatcattaatcgctgtgaatgcgggagtcgaaggatca
attgtcgtggagaagcttctagcttgtgactgggagattggttacaacgcgatgaccgat
gtgtatgaagatcttatgaatgcaggtgtcatagatccttgcagagttttgaggtgcgca
ctccaaaatgcagcttctattgctggggtgattctgatgacccaagctgtccttgtggag
aaaacaaagcagcccaaaccagctgttccttatgttcctggaataactccttag
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