Magnolia sinica: 131221184
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Entry
131221184 CDS
T09699
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear-pore anchor-like
KO
K09291
nucleoprotein TPR
Organism
msin
Magnolia sinica
Pathway
msin03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131221184
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msin03019
]
131221184
Messenger RNA biogenesis [BR:
msin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
131221184
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Nucleoprot-TPR
TPR
Motif
Other DBs
NCBI-GeneID:
131221184
NCBI-ProteinID:
XP_058072335
LinkDB
All DBs
Position
12:complement(31181501..31337153)
Genome browser
AA seq
2133 aa
AA seq
DB search
MPLFITDVELERCSHNASLIADKADSFIRALQLELETVKAQADASSITSEQTCALIEQKY
LSLSSDFAELQSQNAQLSTSLEKRLSELIEVQAEKKQLHIKAISKDGDVERLSVEASEHH
KSKRQLVEMLGQKDIEIGEKNATIKSYLDKIVNLIEDAALKEARLHDKDAELACLRSGSA
RLSQEKELTEKHNLWLDEELTTKVNSLIELRRTHTEFEADMSAKLANVEKKFKDCSICLK
LHKERVRELERKLTSLREELCSTKDAAAANEERYSAEKSTISKLVDLYKESAEEWSRKAG
ELEGVIKALETHLSQVDNDYKEKLEKEASARKDFEKEASDLKEKLGKCELEIVNARKPDK
LSLLPLSSLQSDSSAEELCISGTETGHKEEDSRMLVSKVPVGVSETALAASLLRDGWSLA
RMYEKCQEAVDALHHEQLGRKHSQAILEXVLYEIEEKAEVISDERAEHERMAEAYNLKNQ
KLQQTLSENAYLENIIRELKVDLRRHERDHNIAQKEIIDLQKQVTVLLKECQDIQLRCGV
ASQDPTDSPTSSVVDMEDGTEVEKLTFKDVNGLVGQNVQLRRLVHSLSIKHDQIDAELKE
KFEMELQKHIDEASSKVASVLERSEEQGQMIESLHDSVAMYKRLYEEEIKSRASYSHLPE
TYPEDGRKDLILLSEGSQEATKKALEQASEQVRNLEDDLAKSRSEAIALRLDRDKMAMEA
NFARERLDSFMKEFVRQRDEMNEVLARNVEFSQLIVDYQRRLRESADSLSACDVLPQKLS
MEVSVLKHEKDILIISEKRASDEVRSLSERVHRLQATLDTIHSAEEIREEARAMERRKHE
EHLKRVEREWAEARKELQEERDHVRTLTLDREETLKNTMRKGEEAAKELADALRAVAASE
ARAAIAEARCSELEAKLISPEEKTVEDSGFERSVCSTDEAIGELRKANEEILKLKDEAQA
YKDHMLQYKEIAQVNVVSLKQMESAHERFKAEADKLKKSLEAEILSLRSMVSELESDVLS
KTTEAASSVAEKEEALSSAFAEIKRLNEDNSGQIAQMVALEVQMSSLKEDLEKERQRWRT
TQNNYQRQVILQSETIQELTRTSQALALLQDEASELRKLADARKSENDFLKATWEEEKSD
LQELKDEAERKYNELNDQNKILLNHIEALHIKLAEKERTSAGICSGSTYQDPQGDDDLEK
VVSYLRRSKEMEETEFSLLKQEKLRLQSQLENALKASETAQDLLHSEHASSRDTLFTNEF
KSFKLQVREMNLLRESNMQLREENKHNFEECQKYREIAQKAKMEAVHLGCLLKEKQIEVD
ACRKEIEMKNTEIEQLEHKISEMKQKEKEAVSEDAMKLASEKQQYISSLEQGFANSQLEL
TEMQKKMGDTLQIEATLKSEAEKQKKLASHFKKRVETLTKEKEELSREKQAISKRLEDGR
SSKKATGEAANEQAMKEKEKEKDTRLQMLEKTLEREREDLQKEKEDHRNEKSKRQKIEKM
VLDLMQTVNQEKKKLLEELESHKHARDSMLETSGITSAQLPSETGLDDQTAAYFLAVDNF
DETVNSALNGLGAHPVPSEASLPADASLLATGQQVPDQTLTTLPPSMIPLENSSPVKITE
ERKKRANMAKSNVDARKVGRKLVRPRLERMEEPTADTDASGMEGSSTSDAKPEASDAVPQ
GELTLPPFQLARKRLASSSASELREESLSQQVAISDIAPLLKKSKGSDSPQEGIKEQSNL
LASENPEKPLENLDDSAGRDLVHATIESVVVTKEEERENTKEPTDEPKEPLDGMNGDGLQ
NEFTASVEEFNEKPKETADEVDSFLKVGEVPEPQQSTAEAENERVDGELIPDGKPQEGSG
PLIIGMDLEPGECLAEPVTGATVEVNDAIEIGSPEVLNQDKNEIGEVMEEVAEGSDKSNN
YNDHSALESQRSPQASFGSGEGLPNLLGDSVVSKQASPSFMAESEEVKELQGGRSTTAID
KLERARARAALPNLLGDSVVSKQAGPSFMAEPEEVKELQGGRSTTTIDIHERARARAALP
NLLGDSVVSKQASPSFMAESEEVKELQGGRSTTTIDIRERARARAALRQAGVVSPPLARG
RGRAFGNIKKDGGRGGRGGRGERGQSSGDKEQG
NT seq
6402 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcttcatcacagacgtggagctggagcgatgctcccacaacgcctctctcatt
gcagacaaggccgattccttcattcgagccctccaactcgagctcgagaccgtcaaggcc
caggccgacgcctcctcaatcacctccgagcagacgtgcgccctcatcgagcagaaatac
ctctctctctcgtccgattttgctgagctccagtcccagaacgcccagctctccacctct
ctcgaaaaaaggctctccgagctcatcgaagtccaggctgagaagaaacagcttcacatc
aaggcgatcagcaaagatggagatgttgagcggttgtctgtcgaagcctctgagcatcat
aaatcgaaacggcagttggtggaaatgctggggcaaaaggatatagagataggagagaag
aatgcaaccattaagagctatttggataagattgtaaacttaatcgaggacgctgctttg
aaagaggctaggttgcatgataaggatgcagagttggcatgcttgcgttctggatctgct
cgtctttcacaggaaaaagaacttactgaaaagcataatctctggcttgatgaagagtta
acgaccaaagttaacagcctcattgaacttcgccgaacacatactgaattcgaggcagat
atgtctgctaagcttgctaatgttgagaaaaaatttaaagattgttcaatctgtctaaag
ttgcataaagagagagttagggaacttgaaaggaaattgacatctctgcgggaggagtta
tgctccaccaaagatgctgctgctgctaatgaagagcgctactctgctgaaaaatcaact
atttctaagcttgttgacctttacaaagagagtgctgaagaatggtctagaaaggcagga
gaacttgagggtgtaattaaggcattggaaacacatttgagtcaagtcgacaatgattac
aaagagaaacttgagaaggaagcatctgccagaaaagattttgaaaaggaggcttctgac
ttaaaagaaaaactgggaaagtgtgaacttgaaattgtgaatgctcgaaagcctgataaa
ttgagccttcttccactatccagtttgcagagtgactcaagtgcagaagaattatgtatt
agtggaaccgaaactggtcacaaagaagaggatagtcgcatgcttgtttccaaggtacca
gtaggtgtttcagaaacagcattggcagcttcacttctgcgtgatggttggagtctggct
agaatgtatgagaagtgtcaagaagctgttgatgctctgcatcacgagcagctgggacga
aagcattcacaagccattttggaataggttctgtatgaaatagaggagaaagctgaagtc
atttcggatgagcgagcggaacacgagagaatggcagaagcatacaatttgaagaatcaa
aaattgcagcagacactttcagagaatgcttacttagagaatatcatccgggagttgaag
gtcgacttgaggaggcatgaacgagaccacaatattgcacagaaagagataatcgacctc
caaaagcaggtgacagttcttcttaaggaatgccaggatattcaacttcgttgtggggta
gccagtcaggatcctactgattctcctacttccagtgtggttgatatggaagatgggact
gaagttgaaaagttgacttttaaggatgtcaatggattagttgggcaaaatgtccagcta
cgtagactcgtgcatagtctttctataaagcatgatcaaatagatgctgagttaaaggag
aagtttgaaatggaactacagaaacatattgatgaggcatcatccaaagttgcatccgta
ttagaaaggtctgaagagcaaggacaaatgatagaatcacttcacgactctgtcgcaatg
tataagagattatatgaagaagagattaaatctcgtgcttcttattctcatcttccagaa
acttatccagaagatggcaggaaagaccttatccttctatctgaaggttcacaggaagct
accaaaaaggcccttgagcaggcttctgaacaggtcagaaatctggaagatgatttggct
aaatccaggagtgaagctattgcattacgtttggaccgcgataaaatggcaatggaagca
aattttgcccgagagcgactagatagcttcatgaaagaatttgtgcgtcagagagatgaa
atgaatgaagtactagctagaaacgtggagttctcacagttgatagttgactaccaacga
agacttcgtgaaagtgctgattctttgagtgcctgtgatgtgctcccacagaaattatct
atggaggtgtctgttttgaaacatgaaaaggatatcctgataatttctgaaaaaagagct
tccgacgaagttcggagtttgtcagagagagtgcatcgtctccaggcaaccttggacaca
attcacagtgctgaggagattagagaggaagctagagctatggaaaggagaaaacatgag
gagcatctaaaacgagttgaaagggagtgggctgaagctaggaaagagcttcaagaagaa
cgtgatcatgtccgaactcttacacttgatcgtgaagaaacactgaagaacaccatgaga
aaaggtgaagaagcagcaaaagaattagcagatgctttacgtgcagttgcagctagtgag
gcaagagctgcaattgctgaggctcggtgctctgaattggaggcgaagcttatatctcct
gaagaaaagactgttgaggacagtggatttgagcgttctgtttgctctactgatgaggct
attggggaattgcggaaagcaaatgaggagattttgaaactgaaggatgaagcacaagct
tacaaggatcatatgttacagtacaaagaaatagcacaagtgaatgtggtgtcattgaaa
cagatggaatctgctcatgaaagattcaaagctgaggcggacaaattgaagaagtcacta
gaagctgaaatcctttcactcagatcaatggtttcagaacttgaaagtgacgttctatcg
aagaccactgaagctgcctcttctgttgcagagaaagaagaggctctatcttctgcattt
gcagaaataaagcgtctcaatgaagacaattctggacaaattgcccagatggtggctttg
gaagttcagatgtcttctttaaaggaagatctggagaaggagcggcagcggtggcgcaca
acacagaacaattatcaaagacaggttatcctccaatctgagacaattcaggagttgacg
agaacttctcaggcattagctctactgcaagatgaagcgtcggagttacgtaaattagcg
gatgctcgaaaaagtgaaaacgatttcttaaaggcgacatgggaagaagagaaatcagac
ttacaggaactgaaggatgaagctgagagaaagtacaatgaactaaatgaccagaacaag
attctgcttaatcacatagaagcactgcatattaaattggctgagaaggaacgtacttct
gctggaatttgttctggaagcacctatcaggatccacaaggggatgatgatctggaaaaa
gtggttagttatctccggcggtcaaaagagatggaagaaactgaattctctttgctaaag
caagaaaagttacgactacaatctcaacttgaaaatgctttgaaggcctctgagactgct
caggatttgcttcactctgagcatgccagttctagagatacactgttcacaaatgagttc
aagtcgtttaagcttcaggttagagaaatgaatttgcttcgtgaaagcaatatgcagctt
cgagaggagaacaagcacaactttgaggaatgtcagaaatatcgtgaaatagctcaaaaa
gctaagatggaggccgtgcatctgggctgtctgctaaaggagaaacaaattgaggtggat
gcttgtcggaaagaaattgagatgaaaaacacagagatagaacaattggaacacaagata
tctgagatgaagcagaaagagaaggaagcagtgagtgaagatgctatgaaacttgcttct
gagaagcagcagtacatatcttccttggaacaaggctttgcaaacagccagttggaacta
actgaaatgcagaagaagatgggtgatactcttcaaattgaggcaactctcaagtccgaa
gctgaaaagcaaaagaagttagcatcccatttcaagaagagagtggagacactgaccaag
gagaaggaggaactaagcagagagaagcaagccatttctaaacggctagaagatggtaga
tcaagcaagaaggccactggggaggctgcaaatgaacaagccatgaaggaaaaagagaag
gagaaagacaccaggttacagatgctagagaaaactcttgaaagagagagagaggattta
caaaaagagaaggaagaccatcggaacgagaaatctaagcggcagaagattgagaagatg
gttctagatcttatgcagactgttaatcaggaaaaaaagaagcttcttgaggaacttgag
agccacaagcatgcgagagacagcatgttagagaccagcggaataacatcagctcaactt
ccttccgaaactggcttagatgaccagactgctgcctacttcctggctgtggataacttt
gacgaaacagtgaattctgctcttaatgggcttggagctcaccctgttccttcagaggct
tctctgcctgcggatgcatctctacttgccacaggtcagcaagttcctgatcaaaccctc
actaccttgcccccatcaatgatccctcttgaaaattcctctccagttaaaataacagag
gaaagaaagaaaagggccaatatggcaaaatccaatgttgatgctcgcaaagtaggaagg
aagctggtgcgacctcgtcttgaacgaatggaagagcctacagccgatactgatgcttca
gggatggaagggtcctctacaagcgatgcaaaacctgaggcatctgatgcagtacctcaa
ggtgaacttacattgccaccatttcaattggctcgcaaacgcctagcctcttcatctgcc
tctgaattgcgagaagaatcactcagccagcaagtggcgatctctgatatagcaccgttg
ctgaagaagtccaaaggttcagattcaccccaagagggcattaaagaacagtccaacctc
cttgcatctgaaaatcctgaaaagcctctagagaatttggatgattctgcaggtcgtgat
ctggttcatgctacaattgagtctgtcgttgtcacgaaggaggaagagagagaaaacacg
aaggagccaacagatgagccaaaggaacctttagatggcatgaatggagacggattacaa
aacgaattcactgcctctgtagaagagttcaatgagaagccaaaagaaacagcggatgag
gttgattcatttttgaaggttggggaggttcctgagccacagcagtccacagctgaagct
gaaaatgagagggtagatggggagctcattccagatgggaagccacaagagggcagtggc
ccgctgatcatagggatggacctggaaccaggggaatgtctggctgaaccagttactggt
gctacagttgaagtcaatgatgcaattgagattggttcccctgaggttctaaatcaggat
aagaatgagattggtgaggttatggaagaggttgctgaaggttcagataagtcaaataac
tacaatgatcatagtgctctagagtctcagcggagtccccaggcttcttttggttcaggt
gagggattgccaaatcttcttggggacagtgttgtctcaaaacaggcaagtcctagtttc
atggcagagtccgaggaagtaaaagagttgcagggcgggaggagcacaaccgctatagac
aagcttgagagagctagagcaagagctgcactaccaaatcttcttggggacagtgttgtc
tcaaaacaggcaggtcccagtttcatggcagagcccgaggaagtaaaagagttgcagggc
gggaggagcacaaccactatagacatacatgagagagctagagcaagagctgcactacca
aatcttcttggggacagtgttgtctcaaaacaggcaagtcccagtttcatggcagagtcc
gaggaagtaaaagagttgcagggcgggaggagcacaaccactatagacatacgtgagaga
gctagagcaagagctgcactaaggcaagctggagttgtgtctcctccacttgccagaggc
cgtggaagagcttttggcaatatcaagaaagatgggggacgtggtggacgtggcgggaga
ggtgaacgggggcaatcatcaggcgacaaagagcagggttag
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integrated database retrieval system
