Magnolia sinica: 131221213
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Entry
131221213 CDS
T09699
Name
(RefSeq) LOW QUALITY PROTEIN: transmembrane E3 ubiquitin-protein ligase FLY2-like
KO
K23788
transmembrane E3 ubiquitin-protein ligase [EC:
2.3.2.27
]
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msin04121
]
131221213
Enzymes [BR:
msin01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131221213
Ubiquitin system [BR:
msin04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
131221213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-RING_5
zf-C3HC4_3
zf-C3HC4
PHD_NSD
zf-RING_UBOX
zf-ANAPC11
DUF2921
zf_RING_Vps8
zf-RING_16
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
131221213
NCBI-ProteinID:
XP_058072379
LinkDB
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Position
12:34343954..34383675
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AA seq
577 aa
AA seq
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MSRNSDYQLPLPSKRKGRGLFPPDALLLFICFIFSVFRSSMALRPLKERSTASWGDERLF
IRRDESELGPYSAWNITGTYRFGTWSFLGTTNNSSRFPDFGKSTGNSILELVTSPTKITG
VHYVQGAIIFHDVFDNEHDLGVTQIRVEGVYIWPFRQLRMVANSGTDGEMSQEEDYLLSN
PYHLLGVFSSQVFQESPQDKIRRRKNSFSYDMEKHCNLEIAALLPYIVXSHFSLGNGDRD
HYHLEGLMESPAVDDDGECLSPIVLNATSVNIEVYYNKAVNYTLMVTFVSFLQVLLLIRQ
MEHSNTQSGAAKVSILMIGQQAIMDAYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIF
EMRYLLAIWKASRPMGTGEGWEAMRRELSVLYSRFYGILLGGILIMYELHNFLRPILLIM
YSFWVPQIVTNVIRDTRKPLHPHYILGMTVTRLAIPLYVFGCPSNFVRIEQDRNWCICLG
VFMCLQALILLLQHYLGSRWFIPRQILPDKYSYYRRLENGTSHATDCVICMTAIDLTQRP
NDCMVTPCDHFFHSGCLQRWMDIKMECPTCRRPLPPA
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggaattcggattatcagctgcctctgccgtcaaagagaaagggccggggcctc
ttcccaccagatgcccttcttcttttcatctgtttcattttcagcgtattccggtcttcc
atggctctaaggcctctcaaagaaaggtctactgcttcgtggggcgatgagcggctattt
attcgaagagatgaaagcgagttgggtccctattctgcttggaacataacgggtacctat
agatttggaacatggagcttcctgggaaccaccaataactcttctaggtttcctgatttt
ggaaaatcgaccggtaattctatcttggagttagtgactagtccgacaaagataactggt
gtacattatgtacagggggcaatcatttttcatgacgtgttcgacaatgagcatgatctg
ggggttacacagatcagagtggaaggtgtatatatatggccttttagacagcttcgaatg
gtagccaatagtggaacagatggagagatgagccaagaagaggattaccttttgtccaat
ccatatcacttgcttggagttttctcatctcaggtgtttcaagagtctccccaggataaa
atccggagaaggaaaaattcattttcttatgacatggagaaacactgtaatttagagatt
gcagcgttacttccttatatagtttagagtcatttttcattgggcaatggagatcgtgat
cattaccatttggaaggattaatggagagtcctgctgtggatgatgatggagaatgcttg
tccccgattgttctaaatgcaacttcagtcaatattgaggtctactacaacaaagcggtt
aattataccttgatggtcacatttgtctcttttcttcaagttcttctgttgattcgacaa
atggaacacagcaatactcaatctggtgctgctaaagtttctattttgatgattggacag
caagccatcatggatgcttatctctgtcttttacatctaactgctgggatactagttgaa
tctctgtttaatgcttttgccacagctgccttcttcaagtttgttgtcttctccattttt
gagatgcgatatcttcttgcgatatggaaggcaagtagacccatgggtacaggagaaggt
tgggaagcaatgaggcgtgagttgtcggttctctacagccgtttctatggcattcttttg
ggtggcattttgatcatgtatgagctccataacttcctgcggcccattctcctcattatg
tattccttttgggtacctcaaatagtcactaatgtcatccgcgacaccagaaaaccgtta
catcctcattacatactaggcatgactgtaacacgattagcaattccattgtatgtcttt
ggttgcccaagcaacttcgtgcgcattgagcaggacaggaattggtgtatatgtttgggg
gttttcatgtgtctccaagcattaattcttcttcttcaacactatctcggatctcggtgg
ttcattcctcgtcagatcctacctgataaatatagctactatagaaggctagagaatggc
acaagtcatgctaccgactgtgttatttgcatgactgccatcgatctgacacagcgaccc
aacgattgcatggtgacaccttgtgatcatttcttccattccggctgcttacaaagatgg
atggatataaagatggaatgcccgacttgccggcgtcccctgcctccagcctag
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