Magnolia sinica: 131221360
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Entry
131221360 CDS
T09699
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
msin
Magnolia sinica
Pathway
msin00900
Terpenoid backbone biosynthesis
msin01100
Metabolic pathways
msin01110
Biosynthesis of secondary metabolites
Module
msin_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
131221360
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
msin01006
]
131221360
Enzymes [BR:
msin01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
131221360
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
131221360
2.5.1.29 geranylgeranyl diphosphate synthase
131221360
Prenyltransferases [BR:
msin01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
131221360
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
131221360
NCBI-ProteinID:
XP_058072590
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All DBs
Position
12:complement(51066981..51068528)
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AA seq
386 aa
AA seq
DB search
MGSWAFIPQTCSIVNHQTASKSSTCSMFSQVSRRVSAPMSFFTINPLSCTLFAVRPFSRT
CISATHLAQEHVKEDELGQNPDAQMTKLASHAFDFKSYMLQKGSSVNQALDRAISLREPE
TIHEAMRYSLLAGGKRVRPVLCIAACELVGGDEITAMPSACAIEMIHTMSLIHDDLPCMD
NDDLRRGKPTNHKVFGEGVAVLAGDALLAFAFEHMAEATVGASPGQVIRAIAELAKAIGS
EGLVAGQVVDISSTGVQDVGLEQLEFIHLHKTAALLEGAVVIGAILGGGSDKEVEKLRKF
AQCIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGLEKSREFAEKLNREAQ
DQLLGFNPEKAAPLISLANYIAYRQN
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgggttcttgggctttcattcctcagacatgctcgatcgttaaccatcaaacggcatcg
aaatcatcaacctgctcgatgtttagtcaggtgagtaggagagtttcagcacccatgtcg
ttttttacaataaaccccctctcttgtactctttttgctgtaaggcctttctccagaacc
tgcatttctgctacccaccttgcccaagagcatgtcaaagaggatgaattgggccaaaac
cccgatgcccaaatgaccaaactggcctcccatgcctttgatttcaagagctacatgctc
cagaagggcagttctgtaaatcaggctctcgacagggctatttccctgagggaaccagag
acgatccacgaggcgatgcggtactcgctccttgcaggcgggaagcgggtccgcccagtg
ctctgcatcgccgcgtgcgagcttgttgggggtgatgagatcaccgccatgccatcggcg
tgtgcgatcgagatgatacacaccatgtcgttgattcacgatgacctgccgtgcatggac
aatgacgacctccggcgggggaagcccacgaaccacaaggtgtttggtgagggcgtggcc
gtcctcgctggggacgccctcctggcgtttgcctttgagcatatggcggaggcgacggtg
ggggcttcgccagggcaggtcatccgcgcaattgccgagctggccaaggcaattgggtcg
gaggggctcgttgcagggcaggtagtcgatatcagttcgactggggtgcaggatgtcggg
cttgaacagctcgagttcatccacctgcacaaaacggctgccctcctagagggagctgtc
gtgattggggcgatcctgggcggcgggtcagacaaagaggtcgagaagttgaggaagttc
gcccagtgcatcggtctgctgtttcaagtggtcgacgatatccttgacgtgactaaatcg
tcacaggagttggggaagactgccgggaaggatctggtggccgacaaggtcacttacccg
aaattgttgggacttgagaaatcgagagagtttgccgagaagctgaatcgagaagcacaa
gatcagctcttgggattcaatcccgagaaggcggcccctttgatttcgttagcgaactac
atcgcctacagacagaactga
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