KEGG   Magnolia sinica: 131221938
Entry
131221938         CDS       T09699                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.2-like isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
msin  Magnolia sinica
Brite
KEGG Orthology (KO) [BR:msin00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:msin04812]
    131221938
Cytoskeleton proteins [BR:msin04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     131221938
SSDB
Motif
Pfam: Katanin_con80 WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st EIF3I Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_SCAP Beta-prop_EML WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_SPT8 WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_DCAF4 Beta-prop_WDR75_1st Beta-prop_EIPR1 eIF2A Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_VPS8 Beta-prop_Vps41 Beta-prop_IP5PC_F Beta-prop_HPS5 VPS8_N WDR54 PROPPIN
Other DBs
NCBI-GeneID: 131221938
NCBI-ProteinID: XP_058073224
LinkDB
Position
12:complement(83505324..83533024)
AA seq 787 aa
MAKRGYKLQEFVAHASNVKCLKIGTKSGRLLVTGGEDHKVNLWAIGKPNSLLSLSGHTSP
VESVTIDSAEVLVLSGAFSGAIKLWDLEEAKVVRTITGHRTNCTAVEFHPFGEFFASGSS
DTNLKIWDIRKKGCIHTYKGHTRGISTIRFTPDGRWVVTGGEDNVVKLWDLTAGKLLHEF
KFHGGRIRSIDFHPHEFLLATGSADRTVKFWDLETFELIGSSKPEATGVRAMTFHPDGRT
LFCGLDETLKVFSWEPIRCHDAVDMGWSTLGDLRIHQGKLMGCSYHQNSVGVWVVDVSLI
GPYAAGVMSRSNGHTDPKYDLGLNQSVQQQGSSVTSHTALLTAARDFDTKETLRRSLSQN
SIESNCSAPRKIEPVYDTKEILSSSTTFNFRGTNPPALKKNPMIDLHARSGSQAISRPVV
VPRNSSMVENATVVRKEIPTAESTPPVMVFSKPTHLRKHSNVKDDMDRQLIASESLSLSG
KTNGLDSGIDHNFQFRFIANAEATESSESNHTNIRSTAEKFQRIVSLDPPSTPCCENDAD
SLDSSRVGSVKYVKGVAVELGRTRSLVERWERRERSTSSEAPAISASSDAMPETDTLPSV
MKGQPQTSQMDLVSANDEDAAENIMQNHDLFLSVLQSRLTKLQVVRQFWERNDIKGAINA
VGRLPDHSVQADVVSILLDKAEIVTLDLFSCLLPLLAGLLDSKVGRHMNVSLELLLKLMR
IFGPVIHSVMSSSSPIGVDLQAEQRRDRCNQCYIHLQKIKQVLPSLIRRGGLLAKSALEL
NLAIQEL
NT seq 2364 nt   +upstreamnt  +downstreamnt
atggcgaagcgcgggtataagctacaggaatttgtagctcatgcatccaacgtcaaatgt
ctaaagatcgggacgaagtcaggtagacttcttgttaccggtggagaagatcacaaggtt
aatctgtgggcgattggaaagccaaattctttgctgagcctctctggtcacacaagtccc
gttgaatctgtaactattgattcagcagaggttttggtgctttcaggagctttcagtggt
gcaataaagctttgggatttggaagaggcaaaggttgtccgcactattactggacacaga
acaaactgtactgctgtcgaatttcatccatttggtgagttctttgcatctggttcttct
gatactaaccttaagatctgggatattagaaagaagggatgcattcacacatataaaggc
catactcgaggaattagtaccatcaggttcactcctgatggtcgctgggttgttactggt
ggagaagacaatgttgtaaagttatgggatctgactgctggcaagcttttgcatgaattc
aaattccatggaggacgcattcggtccatagattttcatccccatgagttcctcctagca
acaggatctgcagacagaactgtaaaattctgggatctagaaacctttgagttgattgga
tcttccaaaccggaggccactggagtccgcgctatgacctttcaccctgatggaagaact
ctattctgtggattggatgagactttaaaggttttctcatgggagcctatcagatgtcat
gatgctgttgatatggggtggtctactttgggtgatctccgtattcaccagggaaaactt
atgggttgctcttaccatcaaaactctgttggagtgtgggttgtagatgtttcgctcatt
ggtccatatgcagctggtgtcatgtccaggtcaaatggacatacagatcctaaatatgat
ctcgggctaaatcagtctgtacagcaacagggaagcagtgtaacttctcatacagcattg
cttactgcagcacgagattttgataccaaagagacactaagaagaagcttaagccaaaac
tctatcgaaagcaattgtagtgctccaagaaaaatcgagccagtttatgacacaaaggaa
atcttgtcgtcttcaactacgtttaatttcagagggactaatccgccagctctaaagaag
aatcccatgatagacctgcatgcaagaagtggtagccaagcaataagtagacctgttgtg
gtccctagaaacagttcaatggtggaaaacgcgactgttgtgagaaaagaaattcccact
gctgaatccacgcctcctgttatggtattttccaagccaactcatttgcggaagcattcg
aatgtcaaagatgatatggataggcagttgattgcaagtgaatctttatcattgagtggc
aagaccaatggtctagacagcgggattgatcataacttccagtttaggttcattgccaac
gccgaagctacagaatctagtgaaagcaaccataccaatatcaggagtactgcagagaag
tttcaaaggattgtatccctggacccaccttcaaccccttgctgtgaaaatgatgctgat
tcacttgattcgagcagagtgggttctgtgaaatatgttaaaggagttgcagttgaacta
ggaagaacacggtctcttgtcgagagatgggaaaggagggaaagaagtactagcagtgaa
gcaccagcaatcagtgcttcctctgatgcaatgcccgaaactgatacattgccttctgtg
atgaaaggacagcctcaaacatcacaaatggacttggtttctgcaaatgatgaggatgca
gctgaaaacataatgcaaaatcatgatttattcctaagcgttctacaatcccgccttaca
aaattacaggtggttcggcagttttgggaacggaatgatatcaagggtgccatcaatgca
gtgggaaggttgcctgaccattctgttcaggctgatgtggtcagtattctcttggataaa
gctgaaattgttaccctcgatctcttctcttgcttgctccccctacttgcaggcttactg
gatagcaaggtcggcaggcacatgaatgtctccttggaattgctattgaaactcatgaga
atctttggaccggttatccattcggtcatgtcatcgtcttcacctataggggttgatctt
caagcagagcagaggcgtgatcgctgcaaccagtgctatattcatttgcaaaagattaaa
caagtccttccttcacttattaggaggggagggttgctggcaaaatctgctttggaattg
aatctagccattcaagaattatga

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