KEGG   Magnolia sinica: 131222538
Entry
131222538         CDS       T09699                                 
Name
(RefSeq) uncharacterized protein LOC131222538
  KO
K12828  splicing factor 3B subunit 1
Organism
msin  Magnolia sinica
Pathway
msin03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:msin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    131222538
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:msin03041]
    131222538
   03036 Chromosome and associated proteins [BR:msin03036]
    131222538
Spliceosome [BR:msin03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    131222538
 Complex B
    131222538
 Complex C
   U2 SnRNP specific factors
    131222538
Chromosome and associated proteins [BR:msin03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    131222538
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_EF3_N HEAT_ECM29 Htt_N-HEAT_1 HEAT_2 Cnd1 XMAP215_CLASP_TOG Vac14_Fab1_bd Adaptin_N UME
Other DBs
NCBI-GeneID: 131222538
NCBI-ProteinID: XP_058073635
LinkDB
Position
13:5391821..5397035
AA seq 1278 aa
METIDSDIARAQEERRKKEQELASLTAVTFDADLYGGGNRFEGYEQSIPVNEDEEDQDAG
EREVARKLASYTAPKSVLKELPRGMGGDDIDDFGFKKPQKIIDREDDYRKRRLNRIISPD
RNDAFAMGDKTPDPSVRTYRDIMKEEALKREKEETLREIAKRKKEEEEKKASEGQRDAAS
APVQAAQKRRNRWDQSQEQDSSGKKAKTTSSASDWDMPDSTPGIGRWDATPTPGRVGDAT
PSVSRRNRWDETPTPGRLADADATPAAGGATPGATPAGMTWDATPKLAGLSTPTPKRQRS
RWDETPASMGSATPMPGATPAAAFTPGVTPVGGIDLATPTPGAINLRGAITPEQYNLLRW
EKDIEERNRPLTDEELDAMFPQEGYKILDPPASYVPIRTPARKLLATPTPLGTPLYAIPE
ENRGQQFDVPKEAPGGLPFMKPEDYQYFGALLNEDDEEELSPEEQKERKIMKLLLKVKNG
TPPQRKTALRQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELV
RPFVHKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNT
TARAFSVVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILMGCAVLPHLRSLV
EIIEHGLNDENQKVRTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFL
KSIGFIIPLMDAMYASYYTKEVMFILIREFQSPDEEMKKIVLKVVKQCVSTEGVEADYIR
SDILPEFFRNFWVRRMALDRRNYRQLVETTVEIANKVGVADIVGRIVEDLKDESEPYRRM
VMETIEKVVANLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNALGQRVK
PYLPQICGTIKWRLNNKSAKVRQQAADLISRIAVIMKQCQEEQLMGHLGVVLYEYLGEEY
PEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRG
AEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQER
QNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYI
YAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETSPHV
INAVMEAIEGMRVALGAAAVLNYCLQGLFHPARKVREVYWKIYNSLYIGSQDALVAAYPV
LDDEENNIYSRPELTMIV
NT seq 3837 nt   +upstreamnt  +downstreamnt
atggaaacaatagacagcgatattgctagggcccaagaggagaggagaaagaaggagcag
gagcttgcttctctcactgcagttaccttcgatgccgatctttatgggggtggcaaccgc
tttgagggctatgagcagtcgatccctgtcaacgaagacgaggaagatcaagatgctggg
gagcgagaggttgccaggaaactggcatcttatactgcacctaaatcggtattgaaggaa
ctaccgagaggaatgggtggggatgatattgatgattttggttttaagaaaccacagaaa
atcatcgatagggaggatgattataggaagcggaggctcaaccggataatctcaccagac
aggaatgatgcttttgcaatgggggacaagacacctgatccttctgtgaggacttacagg
gatatcatgaaggaggaggccttgaagagagagaaagaagagacattgagagagattgca
aagaggaagaaagaggaagaggagaagaaggcttcagaggggcagagggatgctgcgtcc
gcgcccgttcaggctgctcagaaaaggaggaacaggtgggaccaatctcaagaacaggat
agtagtggcaagaaggccaaaaccacgtcttcagcatcagattgggacatgccagattcc
actccagggattggcagatgggatgcgactccgactccaggaagggtgggcgacgcaacg
ccatcagtttctcgtcggaaccgttgggatgagactccaacacctggtcgtctggctgat
gctgatgcaaccccggctgctggaggagcgactcctggggcgacaccagctggtatgaca
tgggatgcaacacctaagctggcaggactctctacaccaacacccaaacgccagcgatca
agatgggatgaaaccccagcaagcatggggagtgcaacgccaatgcctggagccacccct
gctgcagcgttcacccctggtgtaaccccagttgggggaattgaccttgcgaccccaacc
cctggagctatcaaccttcgtggtgccattacacccgagcaatataacctgctgagatgg
gaaaaggatattgaggagcggaaccggccattgactgatgaagagctggatgctatgttc
ccgcaagaaggatataagattctggatcctccggcatcttatgttccgatcagaactcct
gctaggaaacttctagccaccccgactcccttgggaactcccctgtatgcgattcctgaa
gaaaatcgtgggcagcaatttgatgttccgaaagaagcacctggtgggttgccatttatg
aagccagaagattaccaatactttggtgcattgctgaatgaagatgatgaggaagagctg
tcaccagaagaacagaaagagcggaagatcatgaagctgctgctcaaggtcaagaatggg
actccgccgcagaggaaaacggcattgcggcagcttaccgataaagctcgagaatttgga
gctggccccctgttcaaccgaattctgccattgctgatgcaaccgacattggaagatcaa
gaacggcatcttctggttaaggtcattgacagggttttgtacaagctggatgagctggtt
cggccctttgtacacaagattttggtggtgattgagccactcttgatcgatgaggactac
tatgcacgtgtggaaggaagagagatcatttccaatctcagcaaagcagctggcttggcc
acgatgattgctgcaatgcgaccagatatcgacaatatcgatgaatacgtcaggaacaca
acagcaagggccttcagtgtggttgcctcagcgttgggtattcctgctctgttgcccttc
ctgaaagctgtgtgccagagtaagaaatcctggcaagcccggcacacgggaattaagatc
gtacagcagattgccattctaatgggttgtgctgttcttccacatctgaggtccctcgtt
gaaatcatcgaacatggtcttaacgatgaaaaccagaaagtgagaactattactgcattg
tctcttgctgcccttgctgaggctgctgctccatatggtatagagagctttgattcggtc
ttgaagcctctgtggaagggtattcgttcacaccgaggcaaagtcttggcagctttcttg
aaatcaattggtttcattattcctctcatggacgctatgtatgcaagttactacacaaag
gaagtgatgtttatactgatccgagagttccaatcgcctgatgaagaaatgaagaagatt
gttctgaaagtggtcaagcagtgtgtgagtacagaaggggtggaagccgattacatccgt
agcgatattcttccggagttcttccgcaatttctgggttagacgcatggcgcttgaccgc
agaaactataggcagcttgtggagacaaccgtcgaaatagctaacaaggttggtgttgca
gatatagtaggaaggattgtcgaggatctcaaagacgagagcgagccgtaccgacggatg
gtgatggagacgatcgagaaggtggttgcaaatttgggagcatctgatatcgatgcccgg
ttggaggagctcctgatcgatggtattctgtatgctttccaagaacagaccagcgatgat
gctaatgtgatgctcaatggttttggtgctgtggtgaatgcccttggacagagggtgaaa
ccgtaccttccccagatttgtggtaccataaagtggcgattgaacaacaagagtgcaaag
gtgaggcagcaagcggcggacctcatatcgaggatcgccgtcattatgaagcagtgccaa
gaagagcagctgatgggccacttgggtgttgtcttgtatgagtatttgggagaagagtac
cctgaagttttgggatctatattgggagcgttgaaggccatcgtcaatgtcatcggtatg
acaaaaatgacgcctccaataaaggatctgctcccgcgcctgactcccattctcaagaac
aggcatgagaaagtgcaggagaattgcatcgaccttgttgggaggattgctgatcgtggg
gcagagtttgtccctgcaagggagtggatgaggatctgtttcgagctacttgagatgttg
aaggcccacaagaaggggatccgacgtgccactgtgaacacattcgggtacattgcaaaa
gcaattgggcctcaggatgtcttggcaacgctgttgaacaacctcaaggtgcaagagcgt
cagaatcgcgtgtgcacgactgtggccatcgcaattgttgcagaaacctgctctcctttc
acggtcctaccggctctgatgaacgagtaccgggtaccggagctgaatgtgcaaaatggg
gtcctgaagtctctctccttcctcttcgagtacataggtgagatggggaaggactacatc
tatgctgtgacgccattgctcgaggatgcacttatggacagggatctggtgcacaggcag
acagccgcctctgctgtcaagcacatggcattgggcgtagctgggctgggctgcgaggat
gccctggtgcatctgctgaactacgtgtggcccaacatattcgagacgtctccccatgtc
ataaatgcggtgatggaagcgattgaagggatgagagtggcattgggcgctgccgcagtc
ctgaactactgccttcaaggcctgttccatccagcacggaaagtaagggaggtgtattgg
aaaatttacaactccctatacattgggtcacaagatgcactcgtagctgcttatcctgtg
ttggatgatgaggagaacaatatctacagcaggccagagctgacgatgatagtctga

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