Magnolia sinica: 131222784
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Entry
131222784 CDS
T09699
Name
(RefSeq) protein RMD5 homolog
KO
K23333
E3 ubiquitin-protein transferase RMND5 [EC:
2.3.2.27
]
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msin04121
]
131222784
Enzymes [BR:
msin01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131222784
Ubiquitin system [BR:
msin04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
CTLH complex
131222784
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTLH
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
zf-RING_5
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
131222784
NCBI-ProteinID:
XP_058073961
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Position
13:complement(10989754..11019043)
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AA seq
385 aa
AA seq
DB search
MELSAIKDAFDRVSKKQKLSSSKTQEVIDQVGREIEHALSRMQSVQDAGSATDQKTILTE
LNSKLNEIGPINQIEGSQKELNVGLSKYAKLLEKSFVMDISKAYRNVDFDVHTVNQIIAA
HLYRQGLFDLGDCFVNEADKPDATSLKSPFVEMYKILEAMRSRNLGPALAWAAANRDMLL
QNGSTLELKLHGLQFVEILQKGSQSDALKYIWTFPAPLVSMHMPEIQKLTICLLWAGCLE
RSPYANFLSLMHWELLSEELTRQFCNLLGQSYESPLSVAVAAGVQGLPTLLKLANVMATK
KQEWLAMKQLPVPVDLGPEFQFHSIFVCPISRDQGSEENPPMLMPCGHVLCKQSIVKLSK
SSTRMFKCPYCPNEATITQCKQLYF
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggagctcagtgccattaaagatgcatttgaccgagtttccaagaagcagaagctgtct
tcttccaaaacccaggaggtgattgaccaggttggccgtgaaattgaacatgcactgtcg
agaatgcagtcagtgcaagatgccgggtcagccactgatcagaagaccattctcacagaa
ctgaacagcaagctgaatgagattggcccgatcaatcagattgaagggtcacagaaggag
ttgaatgttgggttgagtaaatatgccaagctgctcgagaaatcctttgttatggacatt
tccaaggcgtaccggaatgtggactttgatgtccacacagtgaaccagatcattgctgcc
cacctatacaggcagggcctgtttgatcttggcgactgctttgtgaacgaggctgacaag
ccagatgcgacttccctgaaatctccatttgtggagatgtataaaatacttgaggcaatg
agatccaggaatctaggacccgcactggcttgggcggctgctaatcgtgacatgctcctg
cagaacggatcgaccctcgagctgaagctccacgggctgcagtttgtggagatactgcag
aagggaagccaaagcgatgctctcaagtacatttggacattcccagccccattggtttcg
atgcacatgcccgagatacaaaagctcacaatctgccttttgtgggcaggctgtctcgag
cgctctccatatgccaatttcctgtccctgatgcattgggagttgctgtctgaggagctg
acacggcagttctgcaaccttttgggccagtcttatgagagcccgctcagtgtggctgtg
gcggctggtgtccaagggttgcctacattgctgaagctggcgaatgtgatggctacgaag
aagcaagaatggctggcgatgaagcagctgccggtgcctgtggacttgggccctgagttc
cagtttcactcgatctttgtgtgccccatctcgcgtgatcaagggagtgaggagaacccg
ccgatgctgatgccgtgtggccatgtgctgtgcaagcaatcgatcgtgaagctatcaaag
agcagcacacgcatgttcaagtgtccatactgcccgaacgaggccaccatcactcagtgt
aagcagctgtacttctga
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