Magnolia sinica: 131222792
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Entry
131222792 CDS
T09699
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
msin
Magnolia sinica
Pathway
msin03082
ATP-dependent chromatin remodeling
msin03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
131222792
03083 Polycomb repressive complex
131222792
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
msin03036
]
131222792
Chromosome and associated proteins [BR:
msin03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
131222792
Histone modification proteins
HAT complexes
HATB complex
131222792
HDAC complexes
Sin3A-HDAC complex
131222792
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
131222792
PRC2.2
131222792
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
131222792
Heterochromatin formation proteins
Other heterochromatin formation proteins
131222792
Chromatin remodeling factors
NuRD complex
131222792
NuRF complex
131222792
NuRF complex (fruit fly)
131222792
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
Beta-prop_EIPR1
WD40_Prp19
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_2nd
EIF3I
eIF2A
Beta-prop_IFT122_1st
Beta-prop_DCAF12
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
131222792
NCBI-ProteinID:
XP_058073975
LinkDB
All DBs
Position
13:11225715..11263347
Genome browser
AA seq
468 aa
AA seq
DB search
MKERGGKASRPSVDERYTQWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRL
YLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKFKTIIHPGEVNRIR
ELPQNSKIVATHTDSPDVLIWDVEAQPNRHAVLGAADSRPDLILTGHQDNAEFALGMCPN
EPFVLSGGKDKLVVLWSIHDHISASATEPSTKSSGTPSGSSIIKQTSKGGDKGSDSPSIG
PRGIYQGHEDTVEDVQFCPSSAQVFCSVGDDSCLILWDARIGSTPSVKVEKAHNADIHCV
EWNPHDENLILTGSADNSVHMFDRRNLTSSGVGSPVYKFEGHKAAVLCVQWSPDKASVFG
SSAEDGFLNIWDYEKVGKKKERVGTRVPNSPPGLFFQHAGHRDKVVDFHWNTSDPWTIVS
VSDDCESTAGGGTLQIWRMSDLIYRPEEEVLAELEKFKEHILTCSSKS
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagagaggagggaaagccagccggccatcggtagatgaaaggtacacgcagtgg
aaatctctcgttccagtcctctacgactggctcgccaaccacaacctcgtctggccttct
ctttcttgccggtggggtccacaactagagcaagcgacttacaagaatcgtcaacgtctc
tacctttctgaacagactgatggcagtgttccaaatacacttgtcatagcaaattgtgaa
gttgttaaaccgagggttgctgccgcagagcatatatcacagttcaatgaagaagcgcgt
tctccgttcgtaaagaagttcaaaaccatcatacatcctggtgaggtcaacagaatcagg
gaactcccccagaatagtaagatagtagccacgcatacagacagtccagacgttctgatc
tgggatgtagaggcacaacctaatcgtcatgctgtccttggagcggcggattctcgtcca
gatttgattttgactgggcatcaagacaatgctgaatttgctcttggcatgtgcccaaat
gaaccctttgtgctctctggaggaaaggacaaattagttgtgttatggagtatacatgat
catatctctgcttcagcgacagagccctccacaaaatcttcagggacaccatctgggagc
tcaatcattaaacaaacctccaagggtggtgataaaggttcggacagcccttcaattgga
ccgcggggcatataccaaggtcatgaggatactgttgaagatgttcagttctgcccctct
agtgcacaggtattttgtagtgtaggtgatgattcttgcctgatactctgggatgctcgt
attggatcaactccatctgtcaaggttgagaaagctcataatgctgatattcactgtgtc
gaatggaacccccatgatgaaaacctaatcctaactggatcagctgataattctgttcat
atgtttgaccgccggaacctcacttccagcggtgttggatcacctgtttataaatttgaa
ggtcacaaagctgctgtcctttgtgtgcagtggtccccagataaagcgtccgttttcggg
agttctgcagaggatggcttcttaaatatttgggattatgaaaaggttggtaaaaagaaa
gaacgtgttggaacgagggtgccaaattctcctccaggcttatttttccaacatgcgggg
caccgagataaagtcgttgattttcactggaacacatctgatccatggacaattgttagt
gtctctgatgactgtgagagtactgctggaggaggaacattgcagatatggcgtatgagc
gatttgatttacaggccagaggaggaggttctggccgaactcgagaagttcaaagaacac
atactcacatgttcgtcaaaatcttaa
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integrated database retrieval system
