Magnolia sinica: 131222799
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Entry
131222799 CDS
T09699
Name
(RefSeq) eukaryotic initiation factor 4A-8
KO
K03257
translation initiation factor 4A
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msin03019
]
131222799
03012 Translation factors [BR:
msin03012
]
131222799
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msin04147
]
131222799
Messenger RNA biogenesis [BR:
msin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
131222799
mRNA cycle factors
Stress granule specific factors
131222799
Translation factors [BR:
msin03012
]
Eukaryotic type
Initiation factors
eIF-4
131222799
Exosome [BR:
msin04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
131222799
Exosomal proteins of bladder cancer cells
131222799
BRITE hierarchy
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
CMS1
DUF2780
Motif
Other DBs
NCBI-GeneID:
131222799
NCBI-ProteinID:
XP_058073981
LinkDB
All DBs
Position
13:11531899..11537636
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AA seq
413 aa
AA seq
DB search
MAGMAPEGSQFDARSYDAKMNELLTSDGQDFFKSYDEVYESFDAMGLQENLLRGIYAYGF
EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVECQALVLAPTREL
AQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILSSGVHVVVGTPGRVFDMLRRQSLRP
DYIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVFSATMPPEALEITRKFMNNPVR
ILVKRDELTLEGIKQFYVNVEKEEWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMR
SRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP
ENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQKFYNVVIEELPSNVADLL
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaatggcacctgaaggatcccagtttgatgcgcgatcatatgatgccaaaatg
aatgagttgcttacgtcagatggacaagatttctttaaatcatatgatgaggtttatgaa
agctttgatgcaatgggtttgcaagagaaccttcttagaggaatttacgcctatgggttt
gagaaaccctcagcaatccaacagaggggaattgttcctttctgcaagggacttgatgtt
atccagcaagcgcagtctgggacaggcaaaacagcgactttctgctcaggaatcctgcag
cagcttgactatggcctagttgaatgtcaggctttggttcttgctcctactagagaactc
gctcaacaaattgaaaaagtcatgagggcccttggtgattatctgggtgtcaaggttcat
gcttgtgttggtggaaccagtgtccgagaggatcaacgtattctttcaagtggggttcat
gttgttgttggaactcccggtcgcgtttttgacatgttacggagacaatcccttcgccct
gattacattaagatgtttgtattggatgaagcagatgaaatgctctcaagaggtttcaaa
gatcagatctacgacattttccagctcctcccttcaaaggttcaggttggtgtcttctcg
gccacaatgccgccagaggccctcgagatcactcgtaaattcatgaacaaccctgtaagg
atactggtgaagcgagatgaactcactctcgagggaatcaagcagttctatgtcaatgtt
gagaaggaagaatggaagctggagaccctctgtgacctgtatgagacattagccatcact
cagagtgtcatctttgtgaacactcggcgcaaggttgactggctgactgataagatgcgt
agccgggatcacaccgtctctgcgacccatggggatatggatcagaacacaagggacatc
atcatgcgcgaattccggtctggttcctcgcgcgtactcatcaccaccgatctcttggcc
cgtggtattgatgtccagcaggtctcgctcgtcataaactatgatctgccaacacaacca
gagaattatctccatcgcattggacgtagcgggcgttttgggaggaaaggtgttgcgatc
aactttgttacgagggatgatgagaggatgctgttcgacatccagaaattctacaatgtg
gtgatcgaggagcttccatcaaacgttgctgacctcctctga
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