Magnolia sinica: 131222850
Help
Entry
131222850 CDS
T09699
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
msin
Magnolia sinica
Pathway
msin03015
mRNA surveillance pathway
msin04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131222850
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
131222850
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
msin01009
]
131222850
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msin03019
]
131222850
03036 Chromosome and associated proteins [BR:
msin03036
]
131222850
Protein phosphatases and associated proteins [BR:
msin01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
131222850
Messenger RNA biogenesis [BR:
msin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
131222850
Chromosome and associated proteins [BR:
msin03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
131222850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WD40_CDC20-Fz
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ComGF
Motif
Other DBs
NCBI-GeneID:
131222850
NCBI-ProteinID:
XP_058074051
LinkDB
All DBs
Position
13:12563234..12603747
Genome browser
AA seq
542 aa
AA seq
DB search
MNGGGDEGAAASAVPLPALEWKFSQVFGERTAGEEVQEDDCKLKKSLVDSNLEMLVDLVN
ATHHTVDIISAIEFDKSGDHLATGDRGGRVVLFERTDVRDHGSRRDLERLDYSIGRHPEF
RYKTEFQSHEPEFDYLKSLEIEEKINKIRWCQTANGALFLLSTNDKTIKYWKVQEKKVKK
VCEMNLDPSQIAGNGNIASSSISNSPRKHLPNGGCSERSNNYPGNDFLFPPGGIPSLRLP
VVVSSQETNLVARCRRIYAHAHDYHINSISNNSDGETFISADDLRINLWNLEISSQSFNI
VDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLIDLRQSALCDTHSKLFEEQEA
PGSRSFFTEIIASISDIKFSKDGRHILSRDYMTLKLWDINMDSAPVATFQVHEYLRPKLC
DLYENDSIFDKFECCLSGDGLRVATGSYSNLFRVFGCASGSNEATTLEASKNPMRRQVQT
PPRPARSLSSLTRVVRRGAESPGVDANGNAFDFTMKLLHLAWHPTENSIACAAANSLYMY
YA
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcgggggagacgaaggcgctgccgcgtcggcggtcccgctgccagctctcgag
tggaaattctctcaggtcttcggtgaacggactgcaggggaggaggtccaagaagatgat
tgcaaactgaagaagagcttggtggattcaaacttggagatgttggtggacttggtgaac
gcgactcaccacacagttgatataatatcagcaattgagtttgataagagcggagaccat
cttgctactggagaccgaggaggccgagtggttttatttgaaaggacggatgtgagagat
catggatctcgtagagatctagaaaggctggattattcaattgggaggcatcctgagttc
cgctacaaaacagagtttcaaagccatgaacctgagtttgattatcttaaaagcttggaa
attgaggagaagatcaacaagatcagatggtgccagacggcgaatggtgccctgtttctt
ctctctactaatgacaaaacaattaagtactggaaggtgcaagaaaagaaggtgaagaaa
gtttgtgaaatgaatttggacccatcacaaattgcaggcaatggtaacattgcaagttct
agtatatcaaatagccccagaaagcatctcccaaatggtggatgttcagaaaggtccaac
aattatccaggcaacgactttttattcccccctggcgggattccatcattacgtttacca
gtggtagtatccagccaggaaacgaacctcgttgcaagatgtcgaagaatttatgctcat
gctcatgactatcacatcaattccatctcaaataacagtgatggtgagacttttatatct
gccgacgatcttcgaataaatctttggaacttagaaataagcagccagagtttcaatatt
gttgatgtcaagcctgcaaacatggaggatctgactgaggtgataacttctgcagagttc
caccctactcactgtaatatgctagcatatagtagctcaaaagggtcaatacggcttatc
gacctgcggcaatctgcattatgtgatactcattccaaattgtttgaggagcaggaggct
cctggttcaaggtcattctttacggagattattgcctcaatatcagatattaagttttcg
aaggacggacgacacatccttagtcgtgattacatgactcttaagctatgggatataaat
atggattctgctcctgttgcaactttccaggttcatgaatatctgaggccaaagctctgt
gatttgtatgaaaatgactctatctttgacaagtttgagtgctgtctgagtggagatgga
ctccgtgtagctaccggttcatacagcaatctgttccgtgtgttcggctgcgcttctggg
agcaatgaggcaacgactttggaagccagcaaaaatcctatgaggagacaagtgcagacc
cctccaaggccggcaagatctctgagcagcctaacacgcgttgtaagacgaggagctgaa
agccctggcgtcgacgcaaatggaaatgctttcgatttcacaatgaagttgctccaccta
gcatggcacccaactgaaaattcaatcgcatgcgctgctgcaaacagcctgtacatgtat
tatgcatga
DBGET
integrated database retrieval system
