Magnolia sinica: 131223001
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Entry
131223001 CDS
T09699
Name
(RefSeq) tRNase Z TRZ3, mitochondrial-like isoform X1
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msin03016
]
131223001
Enzymes [BR:
msin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
131223001
Transfer RNA biogenesis [BR:
msin03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
131223001
Prokaryotic type
131223001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_4
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
131223001
NCBI-ProteinID:
XP_058074261
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All DBs
Position
13:complement(16814878..16847946)
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AA seq
1026 aa
AA seq
DB search
MPQLSTVRLFFSSNSTSSLSLPFKLSFPSSYIPCKPYTSKKTLIFPLFSASSKRERKPFH
QRRSSSNLRDTKNRERMAEMDEKDTAGFNKRRVEGREKGAPKNLQLKTRKLNPVNTICYV
QILGTGMDTQDTSPSVLLFFDKQRFIFNAGEGLQRFCTEHKIKLSKIDHMFLTRVCSETA
GGLPGLLLTLAGMGDEGMSVNVWGPSDLKYLVDAMRSFIPTAAMVHTRSFGPGSNAAGSA
FSKSDLGKFTDPIVLIDDEVVKISAILLRPSCSEVIQKEDVNVSNSSAVALEENMDCFSK
PLVPCTLSSTRRAGPMLKPGDISVVYACELPEIKGKFDPAKAAALGLKPGPKYRELQLGN
SVMSDRQNIMVNPSDVLGPSSPGPIVLLVDCPTSSHLQGLLSIQSLNDYYADNVDKPQDS
MKSVNCVIHLGPASVTMTADYQKWMKRFGGAQHIMAGHEIKNMEVPILKSSARIASRLNY
LCPQFFPAPGFWSLGYTDTIDPNTITSSEDSSPTLGQSLSAENLLKFHLRPYAQLGLDRS
GIPSLQSPTEIVNELLLEIPEIEDASKHVSQFWHGSENVKQTVPPTHDHLIMIEEPWMHV
DTCISDKGSATQATNASQEEISHLNGSTTSNVKNGSDIPSCLENISREDMEIVLLGTGSS
QPSKYRNVSSIYVNLFSKGSLLLDCGEGTLAQLKRRLGVKGADDAVKVLRCIWISHIHAD
HHAGLARILSLRRELLRGIQHEPLLVIGPRPLKRFLDAYSRLEDLDMQFLDCRHTIEASW
DVLASSLESGSNDSSSSICVGNINTSDGRKVMPQNIETTLFAKGSKMQSFWKKPGNPVDL
DADFPTLKKLHEVLHEAGLEALISVPVVHCPQAFGAVLKAAERINGVGKAIPGWKLVYSG
DTRPCQALIDASYRATVLIHEATFEDGMVEEAVAKNHSTTKEAVEVGASAGAYRIILTHF
SQRYPKIPVFDEAHMNKTCIAFDMMSINIADLPVLPKVLPYLKLLFRNEMITDESDDILL
PVEQAD
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgccccaactctctaccgtcagactcttcttctcctccaactcaacctcttctctttct
cttcctttcaagctctcattcccttcttcttatattccctgcaaaccctatacctctaaa
aagactcttatattccctctattctcagcttcttccaagagagagagaaagcctttccat
cagaggagaagcagcagtaatctcagagacaccaagaacagagaaagaatggctgagatg
gatgaaaaagataccgccggattcaacaagaggagggtagaagggagagagaagggagcg
cccaagaaccttcagcttaaaaccaggaagttgaatcctgtcaatactatttgttatgtc
cagattttggggactggaatggatacacaagatacatcgccatcagttttgcttttcttc
gacaagcaaagatttatattcaatgctggagaggggttgcaacgtttctgcaccgagcac
aagattaagttatcgaagattgatcacatgtttcttactcgtgtttgttcagaaactgca
ggcggacttccaggtcttctattgactttagctggcatgggagatgaagggatgtctgtc
aatgtatggggaccctctgatctcaaatatttagttgatgcaatgcggtcgttcatcccg
actgctgccatggtccacacacgaagctttgggccagggtccaatgctgctggatctgct
ttttcaaagtctgatctgggcaaatttacagatcccatagttctcattgacgatgaagtt
gtcaagatatcggcaattctgctgagaccaagttgctcagaagtgatccaaaaggaagat
gttaacgtgtcgaactcaagtgctgtagctttagaagaaaacatggactgcttttcaaag
cctcttgtaccatgcacgctaagttcaacccgaagagcaggacccatgttaaaacctggc
gatatttctgtggtttatgcctgtgaattgcccgaaatcaagggaaaatttgatcccgca
aaagccgccgcacttggattgaaacccggaccaaagtatcgggaactgcagctcggaaat
tcagttatgtcagatcgtcaaaacattatggttaatccaagtgacgtactgggcccttca
tcccccggaccgattgtccttctcgttgactgtcccacatcatctcatttgcagggattg
ttgtcaatacaatcccttaatgattattatgcagataatgtagacaaacctcaagacagt
atgaagtctgtgaattgtgtgatccacttgggtccagcttctgtcaccatgactgcagat
taccagaagtggatgaaaagatttggtggggcgcaacacatcatggctggacatgaaatc
aagaacatggaagttccaattctcaaatccagtgcaagaattgcatcacggcttaattac
ctgtgccctcagttcttcccagctccaggattctggtcccttgggtacaccgacaccatc
gatccaaacaccattacttcaagtgaggattcttctccaacacttggtcaaagcctttct
gccgaaaatcttctcaagttccatttgcgtccttatgcacagcttggtctggacagatct
gggattccaagcttacagtctcccactgagattgttaacgagcttcttttagagatacct
gaaatagaagatgcttcaaagcatgttagccaattttggcacggttctgaaaatgttaaa
cagactgtacctcctacgcatgaccatcttatcatgattgaagaaccatggatgcatgtg
gacacatgtatatctgataaaggctcggcaacacaagcaacaaatgcatctcaagaggaa
atttcacatctaaatggcagcacgacgtccaacgttaagaatggctctgatattcctagt
tgtttggagaatatatcaagagaagacatggaaattgtccttttgggcactggttcatca
caaccatctaaatatcgtaacgttagttctatttatgttaacctcttctcgaaaggaagt
ttgctgttagattgtggggagggaactttggcccagctgaaaagaaggcttggcgtcaag
ggtgctgatgatgctgtcaaagttctaaggtgtatatggatttcccacattcatgccgat
catcacgctggtctcgctcggatactttccttgcgccgtgagttgttaaggggcatacag
catgaaccattgcttgttattgggccgaggccgctgaagagatttttggatgcatattct
cgactcgaagatcttgatatgcagttcttggattgcaggcacacgatagaggcttcttgg
gatgttcttgctagttctcttgagtcaggcagcaatgactcatcaagttctatctgtgta
ggaaatataaacacgagtgatgggagaaaggtcatgccccaaaatattgaaacgacttta
tttgctaaaggcagcaaaatgcaaagcttctggaagaaacccgggaacccggttgacttg
gatgcggatttccctacactgaagaaattacacgaagtgttacatgaagcgggtttagag
gcattgataagtgtccctgttgtgcactgtccacaggcatttggcgctgtcttaaaagct
gctgagagaatcaatggtgtagggaaggctataccgggctggaagctggtctattctggt
gatacaaggccttgccaagcgctgatagatgcatcttatagagcaacagttcttatacac
gaggcaacctttgaggacggcatggtggaagaagccgttgcgaagaaccatagcacaaca
aaggaggcagttgaagtgggtgcatctgctggtgcgtaccgcatcatcctcacacatttt
agccagagatatccaaaaatcccagtctttgatgaggcacacatgaacaaaacttgtata
gcttttgacatgatgagcattaacatagcggacttgcctgtacttccaaaggttcttcct
taccttaaacttctctttaggaatgagatgatcacagatgaatcagatgatattttgctc
cctgtagagcaggctgattaa
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