Magnolia sinica: 131223284
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Entry
131223284 CDS
T09699
Name
(RefSeq) protein argonaute PNH1-like isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msin03019
]
131223284
03036 Chromosome and associated proteins [BR:
msin03036
]
131223284
Messenger RNA biogenesis [BR:
msin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
131223284
Chromosome and associated proteins [BR:
msin03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
131223284
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
131223284
microRNA pathway
RISC loading complex
131223284
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoMid
ArgoL2
Motif
Other DBs
NCBI-GeneID:
131223284
NCBI-ProteinID:
XP_058074614
LinkDB
All DBs
Position
13:complement(24470333..24482354)
Genome browser
AA seq
941 aa
AA seq
DB search
MPHRQMKDLPEKHVVSKKPLQNSMNQQRATSQNLQSFEVSMQDVKKSIGRRRGRGRGKGA
QMERIAEAVVDGLDVGPPVSSKGLRFHQRPGYGQVGTKCIVKANHFLAELPDKDLIQYDV
TITPEVASRNVNRAIMAQLVKVYRATDLGMRLPAYDGRKSLYTAGLLPFSSKEFYIKIVD
EDDGFGIAREREFKVAIKFVARADLHHLRQFLAGKQADAPQEALQVLDIVLRELSSHRYM
SIGRSFYSPDIRKPQRLGDGLQSWCGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIEFVV
QILGKDALSRPLSDADRIKIKKALRGVKVEVTHRGNVRRKYRISGLTSQPTRELIFPVDD
QMNMKSVIEYFQEMYGFTIRHSHLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNEKQI
TSLLKVTCQRPREQEMDILQTVHQNGYDEDPYAKEFGINITDRLASVEARVLPAPWLKYH
DTGKEKDCLPQVGQWNMKNKKMINGSTVNYWACINFSRSVQESTARGFCQELAQMCQVSG
MEFSREPVIPIYLARPDQVEKALKYVYNAAMNKLKGKELELLLAILPDNNGSLYGDLKRI
CETDLGLISQCCLTKHVFRISKQYLANVSLKINVKMGGRNTVLLDALSWRIPLVSDIPTI
IFGADVTHPETGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLFKTWHDPQR
GTVAGGMIRELLMSFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNY
QPPVTFVVVQKRHHTRLFANNHKDRSSTDKSGNILPGTVVDSKICHPTEFDFYLCSHAGI
QGTSRPAHYHVLWDENNFTADEMQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFY
MEPDLPDNTASRNTCASNGNGSCVRQLPALKEKVKRVMFYC
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgcctcataggcaaatgaaagatctcccagagaagcacgtggtttccaagaaaccactg
cagaactccatgaatcagcagagagccacatcccaaaatcttcagagctttgaggtttca
atgcaagatgttaagaagagtattgggaggaggaggggaagaggtagagggaagggcgcc
caaatggagaggattgctgaggcggtggtcgatggtctcgatgtggggcctccggtttca
agcaaagggctcagatttcatcaacgtcctgggtatggccaagtgggtaccaagtgcatc
gtcaaagccaaccatttccttgctgagttacccgacaaggacttaatccaatatgacgtt
actattactcctgaagtagcatctcgaaatgtgaacagagctatcatggcccagttagtg
aaggtttacagagcaactgatttgggtatgaggcttcctgcttatgatggaaggaagagt
ctttatacagctgggttgctgccttttagctcaaaggagttctacatcaagattgttgat
gaagacgatggatttggcattgcaagagagagggagtttaaggtggcgatcaaatttgtg
gcccgggctgacctgcatcacttacgtcagtttcttgctggaaagcaagctgatgcgcct
caagaggctctacaggttcttgatattgtcttgagggaactatcaagccataggtatatg
tcgattgggaggtctttctattctcctgatatcagaaaaccacagaggctgggtgatggg
ttacaatcatggtgtggcttctaccaaagcatacgcccaactcaaatgggcttgtctctc
aatattgacatgtcttcaacagcttttattgaaccactccctgtaatcgagtttgtagtt
caaattttgggtaaagatgcattgtccaggccactctctgatgctgaccgaattaagatt
aagaaggcccttagaggtgtcaaagtcgaagtcacgcacagaggaaacgtgcggcggaaa
tatcgaatttcagggttgacatcgcagcccacgagggagctaattttccctgtcgatgat
caaatgaacatgaaatcagtcattgaatacttccaagagatgtatggatttaccattcgg
cactctcatcttccatgccttcaagtaggaaatcaaaagaaggcaaattatttgccaatg
gaggcttgcaagattgttgaaggacaacggtatacaaaaagattgaacgagaagcagatc
acgtccctgcttaaagttacttgccagagacccagggaacaagaaatggacattttgcag
acagttcatcagaatggatatgacgaagatccctatgcgaaagagtttgggatcaatatc
actgataggcttgcttctgttgaagctcgagttctacctgccccttggctgaaataccat
gatactggcaaagaaaaagactgtttgcctcaggtcggtcagtggaatatgaagaacaag
aaaatgataaatggaagcactgtaaactactgggcttgtatcaacttttcacggagcgtt
caagaaagtactgctcgtggcttttgccaggagctggcgcagatgtgccaagtctctggc
atggaatttagccgtgaacctgttattccaatctatttggcaaggcctgatcaagtagag
aaggccctgaaatatgtatataatgcagcaatgaacaagctcaaaggaaaagagttggag
ctacttttagccattcttccagacaacaatggctctttgtatggtgatctcaaacggatt
tgtgaaacagacctgggattgatatcgcagtgctgtctaacaaagcatgttttcaggatc
agcaaacaatacctggcaaatgtatcgcttaaaataaatgtcaaaatgggtggaagaaat
acagtgcttttagatgctttaagttggagaattccattagtcagtgatataccgaccatc
atatttggagcagatgtaactcatccggagacaggagaagactccagtccatccattgca
gccgtcgttgcttcccaagactggcctgaagtcacaaaatatgcggggctggtgtgtgct
caagctcatcgacaggagcttattcaggacttgttcaagacctggcatgatcctcagcgt
ggtacagttgctggtggtatgataagggagcttttaatgtccttcagaaaggcaaccgga
cagaaaccattgaggattatcttttacagagatggtgtcagtgaagggcagttctatcaa
gtcttgctatatgaactagatgccatccggaaggcttgcgcatccttagaacctaattac
cagcccccagtaacctttgtggtggtccaaaaacgtcatcacacaagactgtttgcgaat
aatcataaggacagaagtagcactgacaagagcggaaacatcttacctggcactgtggtg
gattctaagatctgtcatcctacggagttcgatttctacctttgcagtcatgctggaatc
cagggaaccagtcgaccagctcactatcatgttctatgggacgagaacaatttcactgca
gatgaaatgcagtctttgacaaataacctctgttacacgtatgctcggtgcacacgatct
gtttctgtagtgcctcctgcatattatgctcacttagctgcatttcgagctcgattttac
atggagccggacctacctgacaacacagcatcaagaaacacatgtgcatcgaatggaaat
gggtcatgcgtgagacagctgcctgcattgaaagagaaggtgaagagggtgatgttttac
tgctga
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