Magnolia sinica: 131223300
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Entry
131223300 CDS
T09699
Name
(RefSeq) ABC transporter G family member 39-like isoform X1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
msin
Magnolia sinica
Pathway
msin02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
131223300
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
msin02000
]
131223300
Transporters [BR:
msin02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
131223300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_29
AAA_16
AAA
AAA_22
RsgA_GTPase
AAA_30
AAA_18
AAA_33
AAA_25
AAA_28
nSTAND3
NTPase_1
RuvB_N
AAA_23
NACHT
AAA_17
Zeta_toxin
cobW
AAA_5
Ploopntkinase3
AAA_11
T2SSE
AAA_19
Motif
Other DBs
NCBI-GeneID:
131223300
NCBI-ProteinID:
XP_058074639
LinkDB
All DBs
Position
13:25089385..25108336
Genome browser
AA seq
1447 aa
AA seq
DB search
MDTANLYRVGSLHRIGSSWRNTTAEDVFSRSSHDEDDEEALKWAALEKLPTYDRIRKGIL
SEVAGELKEVDVKDLGLQERKNLLERLIRVTEEDNEKFLLKLKNRIERVGIEVPTVEVRF
KNLNIEAEAYLGSRALPTIVNFIFNIIEGFLSTLRILPSRKKPVSILRDVSGIIKPYRMT
LLLGPPGSGKTTLLLALAGKLDSEIKVSGTVTYNGHGMEEFVPQRTSAYISQHDLHIGEM
TVRETLAFSARCQGAGTNYEMLMELSRREKEANIRPDPDIDVYMKAASLEGQKESVVTDY
ILKILGLDVCADTMVGDQMLRGISGGQKKRVTTGEMLVGPAKTLFMDEISTGLDSATTFQ
IVNSLRQSIHILGGSALIALLQPAPETYNLFDDIILLSDGQIVYQGPREHVLEFFESMGF
KCPERKGVADFLQEVTSIKDQQQYWANKDEPYTYISIKEFADAFQSFHVGRKLEDELTIP
FDKSKSHPAALTTSKYGISKMGLLKACVAREWLLMKRNSFVYIFKMMKLVVIALIAMTVF
LRTEMHRDSFDEGTIFMGSLFFALVTLLFNGFSEIAMTIGKLPVFYKQRDLLFYPSWAYS
LPTWIIKIPISFVEVAIWVAMTYYVIGYDPNVQRMFRQYAILVLISQMASGLFRLMAGLG
RNMIIGNPVSSFAIFTIMNLGGFVVSREDVKKWWIWGYWISPMMYAQNAIATNEFLGKSW
SHTISNSTETLGVQILRARAIFTESNWYWIGFGALIGHVVLFNIFFTAALAYLNPFKSSQ
AVLSEEALMEKHANRTGEVEGLELSSRGKASTSHSKSKVDASGSAQTEARDDAHKKKKGM
VLPFTPLSLTFDNVRYCVDMPQEMKAKGVEGDQLVLLKGVSGAFRPGVLTALMGVSGAGK
TTLMDVLAGRKTGGYIEGNITISGYPKKQATFARLSGYCEQNDIHSPHVTVYESLLYSAW
LRLPDEVDSTTRKMFIEEVMELVELTSLREALVGLPGVSGLSTEQRKRLTIAVELVANPS
IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGEE
IYVGPLGHHSSQLVKYFESIDGISKIRDGYNPATWMLEVSSITQENILGVNFAEIYRNSD
LFQRNKALIKELSSPPPGSKDLYFPTQYAQPFVTQCMASLWKQQMSYWRNPSYTAVRLLL
TTFIALMFGTIFWDLGSKTSRRQDLFNAMGSMYAAVLFMGVQNAQSVQPVVAVERTVFYR
ERAAGMYSALPFAFAQVAIEIPYVFVQTLLYAVIVYVMIAFDWTVAKFFWYLFFMYFTLL
YFTFYGMMAVSMTPNHDIAAIVSSACYALWNLFAGYLIPRPRIPVWWRWYYWACPFAWTL
YGLVASQFGDIDTPMLDTGKSVSDFIRNYFGFKHDFLGVVAAGVIGFAVLFASIFAWSIK
VLNFQRR
NT seq
4344 nt
NT seq
+upstream
nt +downstream
nt
atggatactgctaatctttatagagttgggagtttgcatagaattggctcttcatggagg
aacacaactgccgaagatgtcttctcaagatcatctcatgacgaagacgatgaagaagca
ctaaaatgggctgctctcgagaagctgccgacttacgaccggatcaggaaagggatactg
agtgaagtcgccggggaactaaaggaggttgatgttaaggatcttgggttacaagagaga
aagaatttgttggagagactgattagagttactgaggaagacaatgagaagttcctgttg
aagctcaaaaaccgaattgaacgagttggaatcgaggttcccacagtcgaagtccgattc
aagaatttgaatatcgaagcggaagcctatcttggtagcagagctttaccaacaatagtc
aacttcatctttaatattattgaggggttcttgagtactcttcgtattcttcccagtagg
aagaaacctgtatcgatcctccgtgatgttagtggaatcatcaagccttacagaatgact
ttgcttttaggacctccaggatctgggaaaacaactttgttattggctttagcaggaaag
cttgattcagaaataaaggtatccggcacagtaacatataatggccatggaatggaggag
tttgtccctcagagaacttctgcttatatcagccagcatgatcttcacattggagaaatg
acagtgagagaaaccttggctttctccgcacgatgccaaggagccggaacaaattatgaa
atgctgatggagctgtcaagaagggagaaagaagcaaacattaggccagatcctgatatt
gatgtctacatgaaggctgcatcactggaagggcagaaggaaagtgtggtcacagactat
attctgaagatcttaggactcgatgtctgtgctgataccatggtgggggatcaaatgctg
aggggcatctcaggaggacaaaagaagcgtgttacaacaggcgagatgcttgtgggacct
gcaaaaacactgttcatggacgagatatccacgggtctggacagcgccacaactttccag
attgtcaattccctgagacagtccattcacatccttggcgggagtgcgctgattgcgctg
cttcagccagcaccagaaacatacaacctcttcgatgacataattcttctctccgacggg
cagattgtgtatcagggtcctcgagaacacgtgctcgagttcttcgaatccatggggttc
aaatgccccgagaggaaaggtgttgctgatttcttgcaggaagtaacttcaataaaagat
cagcagcaatactgggcaaataaagatgagccttacacatacatttccatcaaggaattt
gcggacgcattccaatcattccatgttggtcgtaaattagaagatgaacttaccatccca
tttgacaagagcaagagccatcctgctgctttaacaacttccaaatatggcattagcaag
atgggattgcttaaagcatgcgtcgcaagggaatggttgctgatgaagcgaaactcattt
gtctacatcttcaaaatgatgaaacttgtagttatcgcgctcatcgcaatgacagttttc
ctgcgtaccgagatgcaccgtgattcatttgatgaagggactatttttatgggcagtcta
ttttttgcacttgtgacgctactgtttaatgggttctcagagattgccatgaccatcgga
aagcttcctgttttctacaagcaaagagacctcctcttttatccttcatgggcatactca
ctgcctacatggatcatcaagattcccatatcatttgtggaagttgctatctgggttgcc
atgacttattacgtcattggctatgatccaaatgttcaaaggatgtttagacagtacgca
atacttgtattgattagccagatggcatctggactattccgactcatggctggactgggt
cgaaacatgattattggaaatccagtttcaagctttgcaatttttacaattatgaatctt
ggaggattcgtcgtgtcacgagaggatgtgaagaaatggtggatctggggctactggatc
tctcccatgatgtacgcacagaatgcaattgctacaaatgaatttcttgggaaaagttgg
agccacaccatttctaattcgacagagacgttgggcgtccaaatcctgagggctcgggca
atctttactgaatcaaactggtattggatcggctttggtgcattgattggtcatgtagtc
ctcttcaacatcttctttactgccgctcttgcttatctcaacccatttaagagtagtcaa
gcagttctatcggaagaggccttgatggagaagcatgccaacagaaccggagaagttgaa
ggtctcgagctttcatctcgagggaaagcctccacctcacattcaaaatctaaggttgat
gcatctgggtctgctcagacggaagccagagatgatgctcataagaagaagaagggcatg
gttcttccattcacacctctatccctcaccttcgacaatgtcagatactgtgtagacatg
ccacaggaaatgaaagctaaaggtgttgagggagatcaattagtacttcttaagggtgta
agtggagctttcaggcctggagttcttacagcactgatgggtgtcagcggtgctggtaag
acgaccctgatggacgtcttagccgggaggaaaactggtggatatatagaaggaaacatc
accatttctggttatcccaagaagcaagcgacattcgctcgcttatcaggatactgtgaa
cagaacgatatccactctcctcatgtcactgtctacgaatctctcctttattcggcctgg
cttcggttacctgatgaagtagactccaccacacgaaagatgttcatcgaggaggtcatg
gagcttgtagagctgacatcgctgagggaagcgcttgtcgggttaccgggtgtgagtggg
ctgtcaactgagcagagaaagaggctgaccattgctgttgagctcgtcgccaacccctct
ataatattcatggatgagcctacttccggattggatgcccgagctgcagcaattgtaatg
aggacagtgaggaacactgtggacactggaagaactgtggtgtgcacaattcaccagccc
agcattgacatattcgaagcatttgatgagctcttccttatgaaacgaggcggagaagaa
atatatgttggtccattgggccaccattcttcccagctggtcaagtactttgagtcgatc
gatggtataagtaagataagagatggttataatcctgccacatggatgttggaggtgtct
tccatcacacaagaaaatattctgggtgtcaacttcgctgagatatacagaaactccgat
cttttccagagaaacaaggccttgattaaagaactgagttcccctcctcccggatcaaaa
gatctctacttcccaactcaatatgcacagcccttcgtcacacagtgcatggcttcccta
tggaagcagcaaatgtcatactggcgcaatccttcatacactgccgtgcggcttctcctt
acaaccttcatagctttgatgtttgggacgatattttgggacctcggctccaaaacgagt
aggcgacaggatcttttcaatgccatgggttccatgtatgccgcggttctgttcatggga
gtacagaatgcacaatctgtgcaaccagtcgtcgctgtcgaacgaacagttttctacaga
gagagggctgcaggaatgtattcagctttaccatttgcatttgcacaagttgcaattgaa
atcccatacgtctttgttcaaactctcttatacgcagtcatcgtctatgtcatgatcgca
ttcgattggacagttgccaagttcttctggtatctgtttttcatgtacttcacattgctc
tacttcacattctacgggatgatggcagtcagcatgacccccaatcacgacattgctgca
atagtctcatcagcatgctacgcactatggaatctctttgctggctaccttattccccga
cctagaattccagtgtggtggagatggtattattgggcatgtcccttcgcttggaccttg
tatggattggttgcgtcacagtttggcgacatagatactcccatgttggacactggcaag
tccgtctcggatttcatcaggaactattttggattcaagcatgacttcttgggagttgtt
gctgctggggtaatcgggttcgctgtactctttgcatccatcttcgcctggtcgattaag
gtgttgaacttccaaagaagatga
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integrated database retrieval system
