Magnolia sinica: 131223329
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Entry
131223329 CDS
T09699
Name
(RefSeq) pre-mRNA splicing factor SR-like 1 isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
msin
Magnolia sinica
Pathway
msin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131223329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msin03041
]
131223329
Spliceosome [BR:
msin03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
131223329
Complex C
U4/U6.U5 tri-SnRNP related factors
131223329
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
131223329
NCBI-ProteinID:
XP_058074671
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All DBs
Position
13:26290217..26325159
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AA seq
460 aa
AA seq
DB search
MEIQTSGKPIDSLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR
GPSTAFCLLYKFFTMKLTVKQMHGLLKHSDSPYIRAIGFLYLRYAADPKTLWGWFEPYVK
DDEVSVRASFIGVLSRVEWSNNNNGRICTGSASWTAWVALRKLPREEITFLSATTQYKYY
FDTLFPRTPVPIMRQIVANLERMKLPTKHSGVTGESSRHGSDDTARRPPSVKAALSVSFG
QRAPHRASTRDSSPVRRTLPPPHDRDRSEDPRKSSPRHRSRSREPDRDRSDRDRDRDRDR
SDRDRDRDRDRDRMEKDRDRDRSDRDKDKDRRHGYDRREDRDGRDSHRSRYSERESSRRD
YDRSSRDGSRHGDSGSRRSRSRSRSRSRSRSLQVRSTGSDHRSSPFGDGSREKASVSSNL
AKLKDLYGDGSDPKGDSGANRGPRDIGSEEVIRLGGSTWK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggagatacagacctctggaaagcctatagattctttgctagagaaggtcctttgtatg
aacattctttcttccgattactttaaagagctttacagattgaagacttaccatgaagtt
atagatgagatctacaatcaagttgatcatgtggagccatggatgactggaaattgcaga
ggcccttcaactgcattttgccttctctacaaattctttaccatgaaactcactgtcaaa
cagatgcatgggctattgaagcattctgattctccttatattagagctatcggttttctc
tacttgagatatgctgcagatccaaaaactctttggggttggtttgaaccttatgtgaag
gatgatgaggtatctgtcagggcctcttttatcggagttctctccagggtcgaatggtcg
aacaacaacaatgggcgtatatgtacgggatctgcttcttggacagcttgggttgcccta
cggaagttaccaagagaggagatcacatttctatctgcaacaactcagtataagtactac
tttgataccctcttcccccgcacacctgttccgataatgcgccagattgttgcgaacctt
gagagaatgaagctccccaccaagcattctggcgtgacaggagaatccagtcgccatgga
tcagatgacactgcacgtcggccaccttctgtgaaagctgccctatcagtttccttcggc
cagcgtgctccccaccgtgcatctacaagggactcatcacctgtccggcggaccctacct
cccccacatgatagagatcgcagcgaagatccacggaaatccagccccagacaccgcagc
cggagccgtgaacctgatcgggaccgttcagatagggaccgggacagagatagagacaga
tcggacagggacagggacagagatagagatagagacagaatggagaaggacagagataga
gacagatcagacagggacaaggataaagataggaggcatggttatgatcgacgcgaggat
cgcgacggtagggattctcatcggtccaggtactcagagagagaaagcagcaggcgggat
tatgataggagcagccgggacggcagtaggcatggagattctggttcccggcggagcagg
agccgaagcaggagcagaagcaggagcagaagtttgcaagttcgcagcacaggctccgat
caccgttcgagcccatttggagatgggagcagggagaaggcgtccgtttcaagcaatctg
gccaagttaaaggacctgtatggtgatgggagtgacccgaagggagatagtggggccaac
agaggtcctagggatatcggcagtgaagaagttatcagacttggcgggtccacttggaag
tag
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