Magnolia sinica: 131223374
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Entry
131223374 CDS
T09699
Name
(RefSeq) coatomer subunit beta'-1 isoform X1
KO
K17302
coatomer subunit beta'
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msin04131
]
131223374
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msin04147
]
131223374
Membrane trafficking [BR:
msin04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
131223374
Exosome [BR:
msin04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
131223374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_HPS5
NBCH_WD40
WDR90_beta-prop_4th
PEP5_VPS11_N
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_WDR75_2nd
Beta-prop_WDR35_TULP_N
WD40_like
Beta-prop_Nup120_160
WD_LRWD1
TPR_1
TPR_12
Tn7_TnsA-like_N
TPR_GEMI5
TPR_CcmH_CycH
TPR_IF140-IFT172
Motif
Other DBs
NCBI-GeneID:
131223374
NCBI-ProteinID:
XP_058074765
LinkDB
All DBs
Position
13:complement(28307177..28342789)
Genome browser
AA seq
903 aa
AA seq
DB search
MPLRLEIKRKLAQRSERVKSVDLHPTEPWILVSLYSGSVCIWNYQSQTTAKSFEVTELPV
RSAKFIARKQWIVAGADDMFIRVYNYNKMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWEKGWMCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHLKGVNCVDYFTGGDRPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPE
LPIIMTGSEDGTVRIWHSTTYRLENTLNYGLERVWAVGYMKGSRRVVIGYDEGTIMIKIG
REEPVASMDNSGKIIWAKHNEIQTVNIKTVGADFEVTDGERLPLAVKELGSCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSGLEFVWSSDGEYAVRESTSRIKIFSKAFQ
EKKSMRPTFSTERIFGGTLLAMCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVSI
ASDTSFYILKYNRDVVSSYLDSGKPVDEQGVEDAFELLHETNERVRTGIWVGDCFIYNNS
SWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVVGYTLLLSLIEYKTLVM
RGDLDRANEILLSIPKEHHDSVAHFLESRGMLEDALEVATDPNYRFDLAVQLGRLEVAKA
IAVEVKSESKWKQLGELAMSTGKLEMAEECLSHAMDLSGLLLLYSALGDAEGISKLASLA
KEQGKNNVAFLCLFMLGKLDECLQLLVESNRIPEAALMARSYLPSKVSEIVAIWRSDLNK
VNQKAAESLADPEEYPNLFEDWQVALAVESNLSEERGIHPPAAEYLSHAEKANINLVEAF
KSMQIDGEDETHLENGDSSHELVEENEEGQEEAVEVDADDSSDGAVLVNGNEADEQWVLA
PHH
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcaggctcgaaatcaagaggaaacttgcgcaaagatcagaacgagtgaaatct
gtggatctgcatccaacagaaccatggattcttgtgagtctttattctggaagtgtctgc
atctggaactatcagtcccagactacagcaaagtcatttgaggtcacggaattaccagta
cgatcagcgaagttcatagcacgcaaacagtggattgtggctggagcagatgatatgttt
atccgtgtttacaattataataaaatggataaggtcaaagtgtttgaagcacacacagac
tacatcaggtgtgtggctgtccatccaacccttccgtatgtgctgtcatcatctgatgac
atgcttataaagctctgggattgggagaagggctggatgtgtactcaaattttcgaagga
cactcacactatgtgatgcaagtcacctttaatccgaaagacaccaacacttttgcaagt
gcctcccttgaccgcacaataaagatttggaatcttggctctcctgatccaaattttaca
ttggatgcgcatttgaaaggagtaaactgtgtcgattactttactggtggtgacagacca
tatttaatcactggttctgatgatcatactgctaaggtttgggactaccaaacgaaaagt
tgtgttcagacactggaaggccatacacacaatgtttcagcagtttgttttcatcccgaa
cttcccataataatgacaggttccgaggatggaactgttcgcatatggcattcaaccaca
tatagacttgagaacacgttgaattatggtcttgaacgagtgtgggctgttggatatatg
aaaggttcgcgccgggttgtaattggatatgatgaaggaaccattatgataaaaattggt
cgagaagaaccagttgctagtatggacaatagtggcaagatcatatgggctaagcataat
gaaattcaaactgtgaacatcaagactgtgggggcagattttgaggttacagatggagaa
cgattgcctttggctgtaaaggagttgggaagctgtgatctttaccctcagagcttaaag
cataacccaaatggtaggtttgttgttgtctgtggggatggagaatacattatatataca
gctttagcatggagaaatagatcctttggttcgggattggaatttgtgtggtcatcagat
ggagaatacgcagttagagaaagtacatcaaggattaagatcttcagcaaagctttccag
gaaaagaaaagtatgcgaccaacattttctacggagcgtatttttggcggaacgttattg
gcaatgtgttcaaatgactttatttgcttttatgattgggctgagtgcaggttgatccgt
cgaattgatgttaatgtcaaaaatctttattgggctgatagtggtgatctggtctcaatt
gccagtgatacatcattctacatcctgaaatacaatagagatgttgtatcatcatatttg
gatagtggaaaacccgttgatgagcaaggtgttgaagatgcatttgagcttctccatgaa
acaaacgaacgggtccggactggaatatgggttggggactgtttcatttacaataactca
tcttggcgacttaattactgtgttgggggggaggtgaccactatgtttcacttggatcgg
cctatgtatctgttaggctatcttgcaagccaaagccgggtctatcttattgacaaagaa
ttcaatgttgtgggatacaccttacttctcagcttgattgagtataaaactcttgtgatg
cgtggagatctggaccgggcaaatgaaatcctgctctcaattccgaaggagcatcacgac
agtgtggctcatttcttggaatctcgaggtatgttggaggatgcacttgaagtcgctacc
gatcctaattacagatttgatctagctgtccagcttgggagattagaggttgcaaaggca
attgctgttgaagtaaaaagtgaatccaaatggaagcagctaggagaattggctatgtct
actggaaagttagaaatggctgaggaatgtttatcacatgccatggacttaagcggattg
ttgcttctttattccgcccttggagatgctgaagggatatctaaacttgcatctcttgca
aaagagcaagggaagaataatgttgccttcctttgtctattcatgttaggtaaattagac
gagtgcctccagctattggtagagagcaatcggataccagaggctgcgttgatggcacgg
tcctatcttccaagcaaggtttcggagatagtagcaatatggagaagcgacctgaacaag
gttaaccaaaaagctgcggagtctttggcggatcctgaagagtacccgaatttgtttgag
gactggcaggttgctcttgccgttgagtctaatctttcagaggaaaggggcattcatcct
cccgctgcagaatacttgagccacgctgagaaagccaacatcaatcttgtggaagcattc
aaaagcatgcaaatcgatggagaggatgaaacacatcttgaaaatggagatagcagccac
gagctggtagaagaaaatgaagagggtcaagaagaggccgttgaggtggatgctgatgat
tcttccgatggcgctgtccttgtaaatggcaacgaggcagatgaacagtgggtgcttgca
ccacatcattag
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