Magnolia sinica: 131223445
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Entry
131223445 CDS
T09699
Name
(RefSeq) splicing factor-like protein 1
KO
K13095
splicing factor 1
Organism
msin
Magnolia sinica
Pathway
msin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131223445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msin03041
]
131223445
Spliceosome [BR:
msin03041
]
Complex A
Other components
Complex A specific factors
131223445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
RRM_1
KH_1
KH_12
eIF3g
PHD_4
KH_PNO1_2nd
RRM_5
RRM_Nup35
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
131223445
NCBI-ProteinID:
XP_058074855
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All DBs
Position
13:complement(30938013..30941753)
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AA seq
872 aa
AA seq
DB search
MEYPVISPAGTHKTLDSSSQTLDSSSLHDPLPSSEILASHLPPPSILFSAQTLAPYDQNP
PPPSETLVSYDEIPPPPPPEIQSFSAPDPRPYAEAVDSNGQDPPPPPPSETLPSQDPAYS
SAETLPSSCEPGILPSSAEGQEAPAQNPLSSSEIVTQEKSFSGLNTAPEFGNQKPLLLEN
GVNATNSGTERDYSGGEEETTSRRKRRSRWDPPSESDPQNGDAAGSGGRKRKSRWADDEP
KPIIQLPDFMKEFTGGMDVDPEVQALNIRLLEISRMLQSGLPLDDRPEGARSPSPEPIYD
NMGIRINTREYRARERLTFERQEIISQLIKRNPAFKPPADYRPPKLQKKLYIPMKEYPGY
NFIGLIIGPRGNTQKRMEKETGAKIVIRGKGSVKEGRLQQKRDLKPDLSENEDLHVLVEA
ETQEALNAAAGMVEKLLMPVDEGLNEHKRQQLKELAALNGTIRDDEFCRLCGEQGHRQYA
CPARTSTFKSDVLCKICGDGGHPTIDCPMKGTGKKMDDEYQNFLAELGGTAPDSLTRQNS
ALALPGSGGSGSNPPWASNNSAGGIGGTSQLGLANGAKMVKEHDDTNLYIGYLPPTLEDD
ALIRLFSPFGEIVMAKVIKDRVTGLSKGYGFVKYSDVSQANQAIASMNGYRLEGRVIAVR
VAGKPPQPTIPPAPPAPTMPTYPGPPQQFTPGGPLGTPPPRSYMGAPVPWGPPPIPPYAP
YTPPPPGSSMYAPVQGQAMPPYGVQYPTAVPTMPTGMPSQSMSSSEALQTFPPGMQSQNN
PSAQSVKNNIYGNSVATVAPNAPPAYPPSSLGYPSYYGAVPPPVHHSVADHSQSMGSMPW
APNPPAPPPVSSAEPPTYAADSEYEKFMAEMK
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggagtatcctgtaatttcgcccgcgggaacccacaaaaccctagattcctcttcccaa
accctagattcgtcctccctccatgaccctcttccttcctctgaaatcctagcttctcat
ctccctcctccaagtatcttattctctgctcaaaccctagctccgtacgatcagaacccc
ccgcctccttcagaaactctagtatcgtacgacgaaattcctcctcctcctcctccagaa
atccagtccttctctgctccggacccacgtccttatgctgaagccgtcgattcaaatggt
caagacccgccaccgccgcctccttccgaaaccctaccttctcaagatccggcttattcc
tcggcagaaaccctaccttcttcatgtgaacctgggattctgccatcttctgcagaaggg
caagaagccccggcccaaaacccgctgtcttcttctgaaatcgttacccaagagaagtct
ttttccggtcttaacacggctcctgaattcggcaatcagaagccgctgctgttggaaaat
ggcgtcaacgccaccaacagcggcactgaaagggactactccggcggggaagaagagact
accagccgtcgcaagcgccgaagtaggtgggatcccccgtctgaatccgacccccaaaat
ggagacgcagcaggcagcggtggccggaagcggaaatcccgttgggctgatgatgaacca
aagccgatcatccagctccctgacttcatgaaggaatttactggaggtatggatgtcgat
cctgaagttcaagcccttaacattaggcttcttgaaatcagtcgtatgttacagtcggga
ctccccttggatgaccgccctgaaggcgcccgctcaccttctcctgaacccatttatgat
aacatgggcatccgtataaacacccgcgagtaccgtgcccgtgagagattgacattcgag
aggcaggaaatcatctctcagctgatcaagcggaaccctgcattcaagcccccagcagac
taccggcctcctaagcttcagaagaagctgtacatacccatgaaagaatacccaggttac
aatttcatagggctcataattgggccgaggggaaacactcagaagcgaatggagaaggag
accggtgcaaagattgtgattcggggtaaagggtctgttaaagaaggtagactgcagcag
aagcgcgacttgaagccggatctatctgagaatgaggatttacatgtgttggtggaagct
gagacacaggaagcactcaacgcagctgcggggatggtggagaagctattgatgcccgtt
gatgaagggctcaatgagcacaagcggcagcagcttaaggaacttgctgctttgaatggg
acaattagagacgatgaattttgtaggctatgtggtgagcaagggcaccgccagtatgct
tgcccagctcgtacctcgacttttaagagtgatgttctctgtaaaatttgtggggatgga
gggcatcccaccattgattgccccatgaagggaacagggaagaaaatggatgatgagtat
cagaacttcttggccgagttaggtgggactgcacctgattcgctaactaggcagaactca
gcattggcgcttcctggttctggtggttcagggagcaatcctccttgggccagtaacaac
agtgctggaggtattgggggcacatcgcaactggggctggctaatggtgccaagatggtt
aaggaacacgatgatacaaatttgtatatagggtacctgccacccacacttgaggatgat
gcactgattcgtctgttttcaccctttggtgagattgttatggctaaggtcattaaggat
cgggtgactggattaagtaaaggttatggttttgtgaagtattctgacgtgtctcaagcc
aatcaagctattgctagtatgaatgggtatcgccttgagggtagagttatagctgtaaga
gttgctggcaagccaccacagcctacgatacctccagctcctccagctccaacgatgcct
acgtatcctggaccgcctcagcaatttacacctggtgggcctctcggaaccccaccaccc
agaagctacatgggagcaccagttccttgggggccaccgcctattcctccatatgctcct
tatacccctccgcctcctggttcaagcatgtatgcccctgttcaaggacaagcgatgcca
ccttatggtgttcaatatccaactgcagttccgactatgcccactggcatgccatctcaa
agtatgtcttctagtgaagctctgcagactttcccccctggaatgcaatctcagaataat
ccatctgcgcaatctgtaaagaacaacatctatggaaattcggtagccacggtggcacca
aatgctccgcctgcatatcctccatcttctttaggttacccatcttattatggtgcagtt
cctcctcctgtacatcattcggtggcagaccattcacagagcatgggaagcatgccgtgg
gcaccgaatccgcctgcccctccgcctgtttcatctgcagagccaccaacttatgctgcc
gactctgagtacgagaagttcatggcagaaatgaagtga
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