Magnolia sinica: 131223533
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Entry
131223533 CDS
T09699
Name
(RefSeq) protein argonaute MEL1-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msin03019
]
131223533
03036 Chromosome and associated proteins [BR:
msin03036
]
131223533
Messenger RNA biogenesis [BR:
msin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
131223533
Chromosome and associated proteins [BR:
msin03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
131223533
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
131223533
microRNA pathway
RISC loading complex
131223533
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
PDZ_6
Motif
Other DBs
NCBI-GeneID:
131223533
NCBI-ProteinID:
XP_058074961
LinkDB
All DBs
Position
13:complement(34289987..34299755)
Genome browser
AA seq
967 aa
AA seq
DB search
MSRRGSSGQRATPAPSPSQRGGRGGRGGGGRGAPPPQQQQRPSPSASAAPAAASASSSVS
RDSERRVSLEERSTPAPSTAPAPAPAPALAQQLPPPSSTKAIRFPARPDFGTLGSKCVVR
ANHFLVDIAEDKDLCHYDVSVSPEVASRATNRAIIQQLVATYKESHLGRRKPVYDGRKSL
YTAGPLPFDSKEFVIKLVDKDKTGSTSSTTRREREFKVAIKFAARADLHHLKQFLRARQL
DAPQETIQVLDVVLRESPSFNYTPVQRSFFSPELGQKSSLGDGLECWRGFYQSIRPTQMG
LSLNIDISSTSFYEPIPVVDFVSQYLNLRDPTRPLSDTDRVKIKKALRGVKVYASHRKES
SRQYRISGITAQPMSQLTFPIDDQGHTISVIEYFKEKYRVVLRKILLPCLQVGSDARPTY
LPMEVCQIVEGQRYSRKLNERQVTAILRAACQRPADRERNIHEMVVRNNYNRDQYAQEFG
IQVQDRLVSVDARVLPPPELKYHASGREANCHPRVGQWNMINKKMVNGGNVEYWTCINFS
RLPPDAVHTFCHELVGMCRNIGMTFSPNPLVPIRADRPNRIEMALMDVHKQATANLQSGD
KKKHLQLLIIILPDMSGSYGKIKRVCETELGIVSQCCQPRQASRVNKQYLENVALKINVK
VGGRNTVLADALAGRIHKVTDVPTIIFGADVTHPSPGEDSSPSIAAVVASMDWPEVTKYR
GLVSAQPHRQELIRDLFQVVQDPQRGSMNKGMIREQLIAFRRATGQKPHRIIFYRDGVSE
GQFSQVLLYELDAIRKACVSLEEGYVPPVTFVVVQKRHHTRLFPADHRDRNSTDRSGNIL
PGTVVDTKICHPIEFDFYLCSHAGIQGTSRPTHYHVLWDENKFTADTLQKLTNNLCYTYA
RCTRSVSIVPPAYYAHLAAFRARYYMESDVSDGGSTSAAGGNTRERSTEVRPLPQIKDSV
KEVMFYC
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaggcgcggaagcagcgggcaaagagctactccagcgccatctccatctcagaga
ggtggaagaggtggccgcggcggaggaggtagaggcgctcctcctcctcagcagcagcag
cgaccatcgccatctgcatcagcagctccagctgcagcatctgcgtcttcctctgtaagc
cgcgattccgagcggcgtgtttccttggaggaacgttctacgccagcaccgtcgacggcg
cccgcccccgcgccagcgccagcactggcgcagcagctgccgccaccatcatcgacgaag
gcgatccgattccccgctcggcccgatttcggaactctcggctcaaagtgcgtggtccgt
gcgaaccacttccttgtcgatatagctgaggacaaggacctatgccactatgatgtttct
gtttctccggaggttgcatcccgagccacaaatcgtgccatcatccaacagctcgtagca
acctataaggaatcacatttgggtagaagaaagcctgtttatgatggtagaaagagcctg
tacactgctgggcctttgccatttgactcgaaagaatttgtcatcaagttggtcgacaaa
gataagacaggttccactagttcaacgaccagaagggagagagagtttaaggtggcaatt
aagtttgctgctcgagctgatctgcaccatctgaagcagtttttgcgagctagacagttg
gatgcaccacaggagacaatacaagtgcttgatgtggtgctaagagaatcgccttcattc
aattatactcccgtgcaaagatcttttttctctcctgagttgggtcaaaaaagttctcta
ggtgatggtttggagtgttggaggggattctatcagagcatccgccctacacagatgggg
ctttcgctgaacattgatatctcatcaacgtcattttacgaaccaattccagttgtagat
tttgtatctcagtatctcaatttgcgagatccaacaaggccgttatctgataccgaccgc
gttaagataaagaaggccttgaggggagtaaaggtctatgcctcccacaggaaggagtca
tctagacaatatcgaatttcagggataactgctcagccaatgagccagctgacatttccc
attgatgaccaggggcataccatttctgtcattgagtacttcaaagagaagtacagagtt
gtcctccgcaagattttgttgccatgtcttcaagttggcagtgatgccaggccaacatac
ttacctatggaggtttgtcaaattgttgaagggcagcgatactcaaggaaattgaatgag
cggcaggttactgccatcttgagggctgcttgtcaacgtcctgctgacagggagaggaac
atccatgagatggttgtgcgcaacaattacaacagggatcagtatgcacaggagtttggg
attcaagttcaagacagacttgtttctgttgatgctcgtgttttgccacctcctgagctc
aagtatcatgctagtgggcgggaggcaaactgccatcctcgagtggggcaatggaacatg
atcaacaagaaaatggttaatggtggcaatgtcgaatactggacatgcataaacttctca
cgtctgcctccagatgcagttcatacattttgccacgaactggttggcatgtgtcgaaat
ataggaatgacattcagccccaatccattggtgcccatccgcgcagatcgccctaatagg
attgagatggctctgatggatgtacacaaacaagccactgcaaacctacaaagtggagat
aagaagaaacatctccaattgcttattatcattttacctgacatgagtggttcatatgga
aagataaaacgtgtctgcgaaacggagttgggcatagtgtcgcagtgttgccaaccgaga
caggcatccagagtcaataaacagtatcttgaaaatgttgccttaaaaattaatgtcaag
gttggaggtcgcaacacagtgctagctgatgcccttgcgggtcgtattcataaagtaact
gatgttcccacgataatatttggtgctgatgtcacgcatccatctccaggagaggattcc
agcccgtcaattgcggcagttgtagcttcaatggattggccagaggtcaccaagtaccgg
ggtttggtctcggcacagccgcatcggcaggagctgataagagatctgtttcaagttgtg
caggatcctcagagaggttctatgaacaaagggatgatccgagaacaactgattgcattc
aggcgagcaacgggacagaagcctcatcgcatcatattctatagggatggtgtgagcgaa
ggccagttcagtcaagttttgctttatgagttggatgcaattaggaaggcctgtgtttca
ttggaggaaggatatgttccaccggtgacatttgtggtagtgcaaaagagacaccacaca
cgacttttccctgcagaccatagggaccgtaattcaactgacaggagtggtaacatctta
cctggaactgttgtcgatacgaagatatgccacccaattgagtttgatttttatctctgc
agccatgctggtattcagggaacaagccgtcccacccactatcatgttctgtgggatgag
aacaagttcacagcagatacattgcaaaagctaacaaacaatctctgctacacgtatgcc
cgatgtactcgctcagtgtccatagttcctcccgcatactacgctcacttggcagcattt
cgtgcaaggtactacatggaaagtgatgtatcagatggtgggtccacatcagcagctggt
ggaaacaccagggaacggagcacagaggtccgcccgctgcctcaaatcaaggactcagtg
aaggaagtaatgttttactgctga
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