Magnolia sinica: 131223597
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Entry
131223597 CDS
T09699
Name
(RefSeq) uncharacterized protein LOC131223597 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msin04131
]
131223597
Membrane trafficking [BR:
msin04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
131223597
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
131223597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
ANAPC4_WD40
WDR55
TFIIIC_delta
WD40_Prp19
Beta-prop_RIG_2nd
Synaptobrevin
Beta-prop_IFT122_2nd
Motif
Other DBs
NCBI-GeneID:
131223597
NCBI-ProteinID:
XP_058075014
LinkDB
All DBs
Position
13:complement(37158842..37250932)
Genome browser
AA seq
1134 aa
AA seq
DB search
MFAKRLLQKAMPHQYNVQHGLLTPTDLDPRIAYHYGIPSTASVLAFDPIQRLLAIGTLDG
RIKVIGGDNIEGLLISPKKLPYKSLEFLHNEGYLVSVSNENDIQVWDLEQRRAADCLEWD
ANITAFSVIQGTYFMYVGDEYGLLSVVKYDTEEGKLLRLPYYAPANVIAEAAGISLPNNQ
SIVGILPQPCTSGNRVLIAYENGLIVLWDVSEARVVLMRGYTDLQLKDEGMVGSPSKVGD
ELGGHSSDYAEEKVICSLCWASTCGSILAVGYIDGDVLLWNISSSLSTKGPQVGVPSNNV
VKLQLSSGERRLPVIVLHWSPISKSYNDRGGQLFIYGGDEIGSEEVLTVLTLEWSSGIET
LRCIARVDLTLNGSFADMILINSERTEYNSTAALFVLTNPGQLNVYDGSRLSKVTSEEEK
ASIRAEQFPLTIPTVDPCMTVAKLILLSSDRNSSKALLEMSSAMKSVAAHTLSAGMKWPL
TGGVPSPLSVADDIGVKRLYISGYQDGSVRVWDATYPVLSLVSVLGGEVPGINVAGISAP
VSALDFCSITMSLAVGNECGLVCVYKLCESSNEKNCHFVTEAKHEVHITNHGKGFCCMAV
ISILNLPIRTFHFANSGAKLAVGFERGQVAMLDVGSFSIMFHTDCGSGSSSPVISVVAKE
LSHIDSLVNSPKHKEPKSPRDQEPKSPRDQEPKSPRDPAEGVLFILFRDACIVTIDSLTG
KMTCSRPLHPKKESTAISMYVIDGSISVSGVTSEKKPQQFSQDHDIEKGSDQTKSPGGNK
QQEVELHSSDGTTCSAEGLSNTLILLCCEDALRLYTLKSVMEGDGKAIRKVKFVKPCCWS
TTFKTKNEKACGLALLYQTGVLEIRSLPDLEVVGESSLMSILRWSFKANMVKTMSSADSG
QITLVNGCELAFISLLAVENDFRIPDSLPCLHDKVLAAAADAAINASLYQKKKQGSSPGI
LGGIIKGFKGEKAGHTTDLTGSLLKYSTIEDLESIFSRVPFSVPSMALTDDLGGVELDID
DIEIDEASPTAPASSSIGKHDRRDEETEREKLFHGTASDMKPRLRTAEEIRAQYRKAGDA
SSVAADARDKLVQRQEKLERISRRTAELESGAENFAAMANELVKTMEARKWWKL
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccaaacgccttctgcagaaggccatgccccatcagtataatgtgcaacatggg
cttctgaccccaacagacttggatccacgaattgcttaccactatggtataccgtctact
gcatctgttttggcttttgaccccatccagcgcctcttggctatcggtacattggatggt
agaataaaagtgattggtggtgataatattgaaggtcttctcatatctccaaagaagttg
ccctacaaaagtttagagttcctacataatgaaggataccttgtaagcgtctcaaacgaa
aatgatatccaggtttgggatctggaacaaaggcgtgctgctgattgtttagagtgggat
gccaacataactgctttttccgtaattcagggaacctatttcatgtatgttggagatgag
tatgggctgctgtctgtagtgaaatatgatactgaagaaggaaagcttttgcggttgccg
tattacgctcctgcaaatgttattgctgaagcagctggcatttcgttgccaaataatcaa
tctattgttggaattctcccacaaccttgtacctctgggaatagagtgctaattgcgtat
gagaatgggcttattgttctgtgggatgtttctgaggctcgggttgtacttatgagaggc
tatacggatctccaattgaaggatgagggaatggttggttcaccaagcaaagtgggtgac
gaactcgggggccattcatccgattatgcagaggagaaagtcatatgctcactttgttgg
gcatcaacttgtgggtccattcttgctgtgggttacatagatggagatgtattgttgtgg
aacatttcatctagtttatccacaaaaggcccacaagtgggagtaccatctaataatgtc
gttaagctacaactgtcttctggagagcgaaggctccctgtcattgtcttacattggtct
ccaattagtaaatcttataatgaccgtggggggcaactttttatttatggtggtgatgaa
ataggatcagaagaagtcctcacagttttgactctggaatggtcatctgggatagagact
ttaagatgcattgctcgtgtggaccttactcttaatggatcttttgcagacatgatttta
ataaattccgagagaacggagtataattccaccgctgctctctttgtattgacgaaccct
ggacaattgaatgtatatgatggttctaggttatctaaggtgacatctgaggaggagaag
gcttccattcgtgcagagcaatttccattgacaatacctactgttgatccatgtatgact
gtggcaaagctcatcttactatcctcagataggaactcttcaaaggctctcttagagatg
tcctcagctatgaaatctgtagcagcacatactctttctgcaggaatgaagtggcctttg
actggaggcgttcccagccctttgtccgttgctgatgatattggtgtcaagagactatat
atatcaggctaccaagatggatctgtacgagtatgggatgccacatatccagtcctgtca
cttgtatctgtattgggaggggaggtaccaggtatcaacgtggctggcataagtgctcca
gtatcagcgctggacttctgttccatcactatgagcttggctgttggaaacgaatgtggt
ctggtttgtgtctataaactttgtgagagttccaatgaaaaaaattgtcactttgtgact
gaagctaaacacgaagttcacattacgaatcatggaaaaggattttgttgcatggcggta
atttcgatcctaaatttgcccatccgaacatttcactttgcaaattctggagccaaactt
gctgtgggttttgaacgtggtcaggtagcaatgcttgatgtgggttcattctccattatg
tttcatacagactgtggttctggctcgagttcccctgtcatctctgttgttgcgaaagaa
ttgtcacatattgatagcctagtcaacagtccaaagcacaaggaacccaaaagtccaagg
gaccaggaacccaaaagtccaagggaccaggaacccaaaagtccaagggaccctgctgag
ggtgttctgtttattttattcagggatgcatgtattgtcactattgatagtcttactggt
aaaatgacctgctctcgaccattgcacccgaagaaagagtcaactgcaatttccatgtat
gtcatagatggaagtatttcagtctctggtgttacaagtgaaaagaaaccacagcagttt
tcccaggaccatgacatcgaaaagggatctgatcaaactaagagtccgggtggaaataaa
caacaagaagttgaactacactcctccgatggaactacatgttcagcagagggattatca
aatacacttattttactctgttgtgaggatgcattgcgcctgtacactttaaaatcagtg
atggagggagacggcaaagccatccgtaaagtgaaatttgtaaagccatgttgttggtca
acaacctttaagacgaagaatgagaaagcatgtggactggctttactgtatcagactgga
gtgcttgaaataaggtctttgccagatttagaagtggtaggagaaagctctttaatgtca
attctaagatggagtttcaaggctaatatggttaaaactatgagttctgctgatagcggg
cagattacattggtaaatgggtgtgaattggctttcatctctcttttggctgttgaaaat
gacttcaggattccagattcactgccctgccttcatgataaagttcttgcagctgctgct
gatgctgcaattaatgcctctttatatcagaagaaaaagcagggttctagcccagggatt
cttggtggtatcatcaagggatttaaaggggaaaaggcggggcatacgacagatcttact
ggaagtcttcttaaatatagtactatcgaggatctggagagcatattttcaagggttcca
ttctctgtcccatccatggctctcactgatgatctaggtggtgtggaacttgacatagat
gacattgaaattgatgaagcctcacccactgcaccagcttcatcttcgataggaaaacat
gatagaagagatgaggaaacggagagagagaaattgttccatggaacagctagtgacatg
aagcccagattaagaacagctgaagaaatcagggcccaatatagaaaggctggggatgcc
tcctctgtggcggcagatgcaagagacaagctcgttcagcgtcaggaaaagcttgagagg
atcagcagacgtactgcagagcttgaaagtggggcagagaactttgcagcaatggcaaat
gaacttgtcaaaaccatggaagctcggaaatggtggaagctatga
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