Magnolia sinica: 131223682
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Entry
131223682 CDS
T09699
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 18
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msin03009
]
131223682
Enzymes [BR:
msin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
131223682
Ribosome biogenesis [BR:
msin03009
]
Eukaryotic type
Pre-60S particles
Helicases
131223682
BRITE hierarchy
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Motif
Other DBs
NCBI-GeneID:
131223682
NCBI-ProteinID:
XP_058075129
LinkDB
All DBs
Position
13:complement(43322869..43340261)
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AA seq
665 aa
AA seq
DB search
MAATAVTAGPATNSALTTVRFSDLQPALSPPVLDALTLASFHFCTPVQAATIPLLCSFKD
VSVDAATGSGKTLAFVVPVVEILRRSPDTPKPHQVMGIIISPTRELSSQIYHVALPFIST
LSNIKAMLLVGGSNIKADVDKIEEEGVNLLIGTPGRLYDIMERVDILDFRNLEILILDEA
DRLLDMGFQNQINSIISRLPKLRRTGLFSATQTEAVEELSKAGLRNPVRVEVRTETKVQD
EQACSQKLASSKTPLGLHIEYLVCDEEKKPSQLVDFLSKNLSKKIIIYFMTCACVDYWGV
VLPQLAALKGCPLIPLHGRMKQIARERALASFTKLSSGVLLCTDVAARGLDIPGVDWIIQ
YDPPQDPNVFVHRVGRTARMGRPGSAIVFLLPKEDSYVEFLRLRRVPLQERKSSDNALDI
VPQIRSVAKKDRDVMEKGLKAFVSYIRAYKEHHCSYIFRWKELEIGKLAMGHGLLQLPSM
PEVKHHALSTDGFTPVDGVDVMLVKYKDKSREKQRQKNLQASKTADRKEPKPEKPKPNPS
GVGTKTRKKTGRQRRAAQNVEDAEELEREYRLLKKLKRGAIDESEFDKLMGVDGSFEELE
SPDCDINNSAVASHTELEMSGQNKKQKGKVKRRGAKFGDRKGNKNLKFSSGAKNNKRRNQ
VRSFS
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaacagcagtgacagcgggccccgcaacaaacagcgccctaaccactgtccga
ttctccgatcttcaaccggccctctctccgcccgttctcgatgccctaaccctagcaagc
ttccatttctgcactccagtccaggcggccaccatcccactcctctgctccttcaaagat
gtctccgtagatgctgccacaggttctggaaaaaccctagccttcgttgtccccgttgtc
gagatcctccgtcgatctcccgacactccaaaaccccaccaggtcatggggataataatc
tcaccaacaagagagctgtcatcacaaatataccatgttgcactgccgttcatttcaaca
ttatccaatattaaggcaatgcttcttgttggaggatcaaacataaaagcagatgtggat
aaaatagaggaagaaggtgtcaacttactgataggcacacctgggaggctttacgacata
atggagcgcgtggacatcttagattttcggaaccttgagattttgatcctagatgaggct
gatagactcctggatatgggatttcaaaatcagataaattcaattatatcccgtttgcca
aagcttcgaagaaccggtcttttctcagctactcaaactgaggcagttgaagagctttcc
aaggcaggattgagaaatcctgtgagggtcgaagttagaactgaaactaaagtacaagat
gagcaagcttgctcacaaaaactagcctcttccaaaacaccattggggcttcatatcgag
tatctggtatgtgatgaagagaagaagccgtcacagcttgttgacttcctctcaaagaac
ttatcaaaaaagattatcatctacttcatgacatgtgcttgtgttgattactggggagtc
gttcttccacagcttgctgctcttaaaggttgtcccctaattcctcttcatgggaggatg
aagcagattgcaagggagagagcattggcatcatttacaaagctttcaagtggtgttctt
ctatgtactgatgtagcagcacgaggacttgatattccaggtgttgattggataattcag
tatgaccccccacaagatccaaatgttttcgtacatagagttggccggactgcacggatg
ggcagaccaggaagtgctattgtttttcttttaccaaaggaggactcatatgtagaattc
ttgcggctaagaagggtccctctccaagagaggaaaagttctgataatgctttggacatt
gtccctcagatacgctctgttgctaaaaaggaccgtgatgtcatggagaagggacttaag
gcgttcgtctcatacatacgtgcatataaggagcatcattgctcttacattttcaggtgg
aaagaattggagattgggaagttggccatgggacatggcctactacagctcccttcaatg
cccgaggtaaagcatcacgccctctcaactgatggttttacacctgtagatggtgttgat
gtgatgctggtcaagtacaaagataaatctcgggagaaacagcgacagaagaacttgcag
gcaagcaaaacagctgaccgcaaggaacctaaacctgaaaagccgaagccaaatccaagt
ggtgttggtaccaaaactaggaaaaaaacaggcaggcagcgccgagcagctcagaacgtt
gaagatgcagaggagctggagcgggagtaccgattattgaaaaaactgaagagaggggcc
attgatgaaagcgagtttgataagcttatgggtgtcgatggttccttcgaagagcttgaa
tcaccggattgtgacattaataactctgccgtggcaagtcatactgagcttgagatgtca
gggcaaaacaagaagcaaaaaggaaaagtgaaaagaagaggagcgaaattcggtgaccgg
aaaggaaataagaatttgaaatttagttctggggcaaagaataacaaaagacggaaccaa
gttcgttcctttagctaa
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