Magnolia sinica: 131223743
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Entry
131223743 CDS
T09699
Name
(RefSeq) uncharacterized protein LOC131223743
KO
K12816
pre-mRNA-processing factor 17
Organism
msin
Magnolia sinica
Pathway
msin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131223743
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msin03041
]
131223743
Spliceosome [BR:
msin03041
]
Complex C
Other components
Step II factors
131223743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
EIF3I
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_DCAF4
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
WD_LRWD1
eIF2A
Beta-prop_NWD2_C
Beta-prop_SCAP
Beta-prop_IFT140_1st
DExH14_plug
Motif
Other DBs
NCBI-GeneID:
131223743
NCBI-ProteinID:
XP_058075223
LinkDB
All DBs
Position
13:complement(48779780..48801273)
Genome browser
AA seq
569 aa
AA seq
DB search
MDLQQPSPPSSPSSSPSSSPLRIPLPSKTSAPSVNPTLRNLHKPIDPVQHAVTFNPTYDQ
LWAPIYGPPHPFAKDGIVQGMCNHKLGFVENAAIEPFVFDEQYNTFHKYGYAAYPSASAC
YNYVGDLDALWENDAISVYNIPQHEQKKQKLKKKALESEENEDAEVGPSVENPTSQEWLM
KNRKSPWAGKKERVQIELTEEQKKYAEEYAEKNAEKKAEKERGGGRDKPEFADKSTFHGK
EEHDYQGRSWIAPPKDAKATNDHCYIPKRWVHTWSGHTKGVSAIRFFPKHGHLLLSAGMD
TKVKIWDVFNSGKCMRTYMGHSKAVRDISFSNDGTKFLSAGYDKNIKYWDTETGKVISTF
STGKIPYVVKLNPDEDKQNILLAGMSDKKIVQWDMNSGEIMQEYDQHLGAVNTITFVDNN
RRFVTSSDDKSLHVWEFGIPVVIKHISEPHMHSMPSISLHPNSNWLVAQSLDNQILSYST
RERFQLNKKKRFAGHITAGYSCQVNFSPDGRFVMSGDGEGRCWFWDWKSCKVFRTLKCHE
GVCIGCEWHPLEQSKVATCGWDGMIKYWD
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggatttgcagcaaccctcccctccctcatctccttcatcttctccttcttcctcccct
ctccgaatccctcttccctccaaaacatccgcaccttccgtcaatcccacccttcggaat
ctccacaaacccatcgatcctgtccagcatgccgtcaccttcaaccccacctacgatcag
ctctgggctcccatctacggcccaccccaccccttcgccaaagatggcatcgtccagggc
atgtgcaaccacaagctcggcttcgttgagaatgctgcaatcgagccgtttgtctttgac
gagcagtacaacactttccacaagtacgggtacgccgcctatccatctgcctccgcctgc
tataattacgtcggtgaccttgatgccctgtgggagaacgacgctatctcggtgtataac
atcccacagcacgagcagaagaaacagaagcttaagaagaaggcgttggagagtgaggag
aatgaggatgccgaagtagggcccagcgttgaaaaccctacatcgcaggagtggctgatg
aagaatcggaagagcccgtgggctgggaagaaggaaagagtgcagatagagcttaccgag
gagcaaaagaagtacgcagaagagtatgctgagaagaatgctgagaagaaggctgagaag
gagagaggtgggggcagggacaagcccgaatttgctgacaagagcactttccacgggaaa
gaggagcacgactatcaggggcggtcgtggattgctcccccgaaagacgcgaaagccaca
aacgatcattgctacattcccaagcggtgggtccacacgtggagtgggcacacaaagggt
gtctcggcaatccggttcttcccaaagcatgggcatcttctcctctcagcaggcatggat
acaaaggtcaagatctgggatgtattcaattcaggcaagtgtatgcgtacttacatgggt
cactcgaaggcggtccgtgatatctccttctcgaatgacgggaccaagttcttgagtgcc
ggctatgacaagaacatcaagtattgggatacagagacagggaaggtgatctcgactttc
tctacaggtaaaattccttatgtggtaaagcttaatccagatgaagataagcaaaacata
ctcctcgcgggtatgagtgataagaagattgttcagtgggatatgaacagtggagaaatc
atgcaagagtatgatcagcatttgggtgcagtaaatactattacatttgtggacaacaac
cggaggtttgttacttcgagtgatgacaagtccctccatgtttgggagtttgggattcca
gttgttattaagcatattagcgagcctcacatgcattcaatgccttctatatcgcttcac
cccaattcaaattggctcgtggcgcagagtttagacaatcagattctcagctatagcaca
agggagaggtttcaactcaacaagaagaagaggtttgcagggcacataactgcaggctat
tcatgccaggtgaatttttcacctgatggacggttcgtcatgtctggagacggtgagggc
agatgctggttttgggattggaagagttgcaaagtctttagaactttgaaatgtcacgaa
ggggtttgtattggatgtgagtggcatccattagagcagagcaaagttgcgacttgcggc
tgggatggcatgatcaagtactgggactaa
DBGET
integrated database retrieval system
