Magnolia sinica: 131224023
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Entry
131224023 CDS
T09699
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
msin
Magnolia sinica
Pathway
msin00040
Pentose and glucuronate interconversions
msin01100
Metabolic pathways
Module
msin_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131224023
Enzymes [BR:
msin01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
131224023
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
131224023
NCBI-ProteinID:
XP_058075589
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Position
13:complement(5843203..5847800)
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AA seq
448 aa
AA seq
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MGFQRQLVPIIMLWFCYSSCYCNLLEDPLSAFNHGEGPYDYFDKINKLGQMSTTIRFGRS
ILSSLKFDHMASPKSSATVVNVNDFGAKADGTDDTKAFEKAWTKACSSAPSVLVVPANKN
YLLKPITFSGPCRSSITVLILGTIEAPSHPSAWDGLDQKHWLSFQNVQNLKVQGGGTING
NGEVWWKNSCKINKALPCKDAPTALTFYSCNNLIVNDLKIKDSQQIQVSFERCVNVLAFN
LMITAPETSPNTDGIHITKTQNIQIMNSVIRTGDDCISIESESHVVKVMNITCGPGHGIS
IGSLGDKKSEAHVSQVIVDGATLFGTTNGVRIKTWQGGSGSATNITFQNIAMHNVRSPII
IDQNYCDSKYTCPEKGSAVQVSDVVYKNITGTSASNEAMTFDCSQSSPCNGIVLQGINLV
GDAGKITSRSCKNVRGSTIGKVVPPSCF
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgggtttccaaagacagttagttccaatcatcatgctatggttttgttattcttcctgt
tattgcaacttgctagaggacccactctcagctttcaatcacggggaggggccctatgac
tatttcgacaaaatcaacaaattgggccaaatgtcaactaccatccgtttcggacggtcg
atcttgagttccttgaagtttgatcacatggctagtcctaaatcttcagccaccgtagta
aatgtgaatgattttggagccaaggctgatggaacagatgacacaaaggcatttgagaag
gcctggaccaaggcttgctcatcagctccttctgttcttgtggtgcccgcaaacaagaac
taccttctcaaaccaatcaccttttcaggcccttgcagatcttccattacagtgctgatc
cttggaaccattgaagctccttcccatccatcggcttgggacggattagaccaaaagcat
tggcttagttttcagaatgttcaaaatcttaaagttcaaggtggtgggaccattaatgga
aatggagaggtgtggtggaagaactcttgtaaaatcaacaaagctcttccttgcaaagac
gcgccaacggccttaaccttttattcatgcaacaacttgatagtgaatgacctgaagatc
aaagacagccaacaaatacaagtttcttttgagagatgtgtcaatgtacttgctttcaat
ctcatgataactgcaccagagacaagccctaacaccgacggcattcacatcacaaagacc
caaaatattcagatcatgaattctgtcatcagaactggtgatgattgcatctcaattgaa
agtgagtctcacgttgtcaaagttatgaatataacctgtgggccaggccatgggatcagt
atcggcagtttaggagataaaaagtcagaagcccacgtatcacaagtgatagtggatgga
gccaccttgttcggaacaaccaatggagtcaggatcaaaacctggcagggaggatctgga
agtgcaaccaacatcacattccaaaacattgcaatgcacaatgtcagaagccccatcatc
atagaccaaaactactgtgactccaagtacacttgcccagaaaagggatcggctgtgcaa
gtgagtgatgtggtctacaagaatatcacaggaacaagtgcctcaaatgaggccatgaca
tttgattgtagccagagctctccatgcaatggaatagtgttacaaggcattaatcttgta
ggagatgcggggaaaataacaagcagatcatgcaagaatgttagggggtccaccattggg
aaggttgtcccaccttcttgcttctag
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