Magnolia sinica: 131224028
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Entry
131224028 CDS
T09699
Name
(RefSeq) LOW QUALITY PROTEIN: polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
msin
Magnolia sinica
Pathway
msin00040
Pentose and glucuronate interconversions
msin01100
Metabolic pathways
Module
msin_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131224028
Enzymes [BR:
msin01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
131224028
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
131224028
NCBI-ProteinID:
XP_058075591
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Position
13:5980915..5983875
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AA seq
397 aa
AA seq
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MSTTIHFGRSTLSSLKFDHVASHESSATVVNVNDFGAKGDGTDDTKAFEKAWTKACSSAP
SVLVVPANKNYILKPITFSGPCRSSITVMILGTIEAPSHPSAWDRLDQKHWLSFRNVQNL
RVQGGGTINGNGEMWWKNSCKINKALPCKDVPTALTFYSCNNLIVNDLKIKDNQQIQVSF
ERFVNALAFNLMVTAPETSPNTDGIHITSTQNIQIMNSVIRTGDDCISIESGSHIVKVMN
ITCGPGHGISIGSLGDEKSEAHVSQVMVDGATLFGTTNGVRIKTWQGGSGSATNITFQNI
AMHNVRRPIIIDQNYCDSKYTCPEKGSAVQVSDVVYKNITGTSTSNEAMTFDCSQSSPCN
GIVLQGINLVGDAGKITSRSCKNVRGSTIGKVVPPCF
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccaccatccatttcggacggtcgaccttaagttccttgaagtttgatcacgtg
gctagtcatgaatcttcagccaccgtagtgaatgtgaatgattttggagccaaaggtgat
ggaacagatgacacaaaggcatttgaaaaggcctggacgaaggcttgctcatctgctcct
tctgttcttgtggtgcctgcaaacaagaactacattctcaaaccaatcaccttctcaggc
ccttgcagatcttccattacagtgatgatcctaggaaccattgaagctccttcccatcca
tcggcttgggaccgactagatcaaaagcactggcttagttttcggaatgttcaaaatctt
agagtccaaggtggtgggaccattaatggaaatggagagatgtggtggaagaactcttgt
aaaatcaacaaagctcttccttgcaaagacgtgccaacggccttaaccttttattcatgc
aacaacttgatagtgaatgacctaaagatcaaagacaaccaacaaatacaagtttctttt
gagagatttgtgaatgcactagctttcaatctcatggtaactgcaccagagacaagccct
aacactgatggcattcacatcacaagcacccaaaatattcagatcatgaattctgtcatc
agaactggtgatgattgcatctcaattgaaagtgggtctcacattgtcaaagttatgaat
ataacctgcgggccaggccatgggatcagtatcggcagtttaggagatgagaagtcagaa
gcccatgtctcacaagtgatggtggatggagccaccttgtttggaacaaccaatggagtc
aggataaaaacctggcagggaggatctggaagtgcaaccaacatcacattccaaaacatt
gcaatgcacaatgtcagaaggcccatcatcatagaccaaaactactgtgactccaagtac
acttgcccagaaaagggatcggctgtgcaagtaagtgatgtggtctacaagaatatcaca
ggaacaagcacctcaaatgaagccatgacatttgattgtagccagagctctccatgcaat
gggatagtgttacaaggcattaatcttgtaggagatgcgggaaaaataacaagcagatca
tgcaagaatgttagggggtccaccattgggaaggttgtcccaccttgcttctag
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