Magnolia sinica: 131224148
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Entry
131224148 CDS
T09699
Name
(RefSeq) probable polygalacturonase At1g80170
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
msin
Magnolia sinica
Pathway
msin00040
Pentose and glucuronate interconversions
msin01100
Metabolic pathways
Module
msin_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131224148
Enzymes [BR:
msin01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
131224148
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
131224148
NCBI-ProteinID:
XP_058075676
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Position
13:21066685..21076309
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AA seq
486 aa
AA seq
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MWSTAFLATETKDANIRKNETPLMQINERMNTSSPSSKAKGITLGAPMSPNQRGMRGGVG
NMITHQESRKLVIILTLAIAGLAILAIAIAVSLTRSHRHTRTEFNVMDYGAVGDGKADDS
QAFSNTWQAACHRPPRSAVMIIPKEKTFLVNPPVEFNGPCKSSNISVQVAGNILAPDSPD
AWQGLKKPSLWLAFRRVSGLTIGGGGQIDGSGSNWWAKSCKRNKKPGCTTKAPMILNILS
STNVVLKDLKFMNSPNFHIHIWNTSNVRVTNLTIKAPGRSPNTDGIHVQSSHHVLIDSLT
IGTGDDCVSIGDQTSDITVHHVFCGPGHGISVGSLGKNATNASVENIHVSYSNFFNTTNG
ARIKTWQGGGGYARNITFEKLKFTKVKNPIIINQYYCDRVQPCKNLTAGVKISDVRFMDL
FGTSISNVSINLSCSETVACTGIILDNVNLTPAILGNPSTAYCLDTNGSAIGMVEPHVPC
LTSLKA
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgtggtccactgctttcctcgctacggagacaaaggatgcaaacattcggaagaacgaa
acccctcttatgcagattaatgagcgtatgaatacaagttctccctcaagcaaagcaaaa
ggaatcactttaggggcccccatgtctccaaaccagcgtggtatgagaggtggagttgga
aacatgattacacatcaagaatcgcgtaagttggtaattatacttactttagccatagct
ggtttggccatacttgctatagccatagctgtttcgctgactcgttcacaccgccacact
cggactgaattcaatgttatggactatggagcagttggtgacggcaaagcagatgactcc
caagcattttcaaatacgtggcaagctgcttgtcacaggccaccgagatctgcagtgatg
attatccccaaggagaaaacatttcttgttaatccccccgtagaattcaatggcccatgc
aagtccagcaacatcagcgttcaagttgcagggaatatactggctccggactcccctgat
gcatggcaagggttaaaaaaaccaagcttgtggttggcattccgtcgtgtgtccggtctc
accattggtggcggtggtcaaattgatggcagtgggtccaactggtgggccaaatcatgc
aaacgcaataagaagccgggatgcacaactaaagccccgatgattctgaacatcctatca
agcaccaatgttgttttgaaagatttgaagtttatgaacagcccaaattttcatattcac
atatggaatacttcaaacgttagagttacaaaccttacaatcaaggcgcctggacgtagc
cccaacaccgatggcattcacgtccaatcgtcccaccatgttttgatagactctcttacc
attgggaccggtgatgattgcgtttccattggggaccaaacttcagacattactgtccat
catgttttctgtgggcccggtcatggaataagcgtggggagcttaggaaagaatgcaact
aatgcatcggtagagaacattcatgttagctattccaatttcttcaatactacgaatgga
gcaaggatcaaaacatggcagggtggtgggggctatgcaaggaatatcacatttgagaag
ctcaagttcacaaaagtgaagaatcctatcatcatcaatcaatattactgtgatagggtc
caaccgtgcaaaaatctgacggccggtgtcaaaataagtgacgtgagattcatggacttg
tttgggacttcgatcagcaacgtctccattaacctcagttgcagcgagaccgtggcttgc
actggaatcatcttagacaacgtcaatctcacaccagccatcctaggaaatccatccact
gcttactgtcttgataccaatggaagtgccattggtatggttgaaccacatgttccatgt
ctaacctctctcaaggcatga
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