Magnolia sinica: 131224652
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Entry
131224652 CDS
T09699
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 2
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
msin
Magnolia sinica
Pathway
msin03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131224652
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msin03019
]
131224652
Messenger RNA biogenesis [BR:
msin03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
131224652
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
131224652
NCBI-ProteinID:
XP_058075909
LinkDB
All DBs
Position
14:78746075..78768481
Genome browser
AA seq
201 aa
AA seq
DB search
MVSSSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEH
NHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAANAATLQPDWQIGECVAIW
WRPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRY
GPVISTIPQQLSRFQFNMINA
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcttcatcgccggtggtgaatacataccctctgtcgagctataccttcggaacg
aaggagccgaagatggaaaaagacacttctgttgcagatcgtcttgctcgaatgaaagtc
aactatatgaaagaaggtatgcggacgagtgtggaagcaattctgctggttcaggagcat
aaccatccccatatacttctcttgcaaattggaaataccttctgcaaacttcctggtgga
cgtttgaagcctggagaaaatgaaatcgagggcttgaaacgtaaattgtccagcaaactt
gctgctaatgcagctactcttcagccagattggcagattggagagtgtgtagccatctgg
tggaggccaaacttcgaaacaattatgtacccatactgccctccacacataacaaaaccc
aaggagtgtaagaagcttttccttgttcacctgtccgaaagggagtattttgcggtgccg
aaaaacctgaaactgcttgctgttccactgtttgaactctacgacaatgttcagagatat
gggccggttatctccactatcccacaacaactatccagattccagttcaacatgatcaat
gcatga
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