Magnolia sinica: 131224742
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Entry
131224742 CDS
T09699
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
msin
Magnolia sinica
Pathway
msin04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
131224742
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msin04121
]
131224742
Ubiquitin system [BR:
msin04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
131224742
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_6
F-box-like
LRR_4
F-box
Motif
Other DBs
NCBI-GeneID:
131224742
NCBI-ProteinID:
XP_058076046
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Position
14:complement(25475578..25480844)
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AA seq
573 aa
AA seq
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MALIFPEEVLEHIFSFIVSDKDRNAVSLVCKSWYQIDRCCRHRIFIGNCYAASPSVLIRR
FPEIRSVSLKGKPHFADFNLVPSDWGGSVGPWIEAMAEAYPCLEELRLKRMVVTDDNLEL
LSRAFKNFRVLVLVSCEGFTTNGLAAVAANCRNLRELDLQENDVDDSSGHWLSQFPESCT
SLVSLNIACLEGEVNFSVLERLVARCPNLKTLRLNHAVPLDKLANVLRQAPQLVDLGTGA
FSAEPRPELYLKLASAFEGCKQLKSLSGFWSVVPTYLPAIYSICAGITSLNLSYASVQGP
DLIKLVSQCRSLQRLWVLDYIEDNGLDVVAASCKDLRELRVFPSDPYGGAGQPVSLTEQG
LVAVSAGCPVLNSVLYFCRQMSNAALLTVARNRPNLTRFRLCIIEPQMPDYLTQQPLDIG
FGAIVKSCKDLRRLSMSGLLTDRVFEYIGVHAKQLEMLSVAFAGESDLGLHHVLSGCKSL
RKLEIRDCPFGDKALIANAAKFETMRSLWMSSCSVSFGACKLLAEKMPRLNVEVIDESGQ
PDSQPESCPVEKIYVYRTIAGPRSDMPDFVRTM
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggccttgatcttcccagaagaagtccttgagcacatcttctccttcatcgtctccgac
aaggatcggaacgccgtctccctcgtctgcaagtcttggtaccagatcgaccggtgctgc
cggcatcggatcttcatcggcaactgctacgctgccagccctagtgtcttgatccgacgg
ttcccagagatccgctccgtttccttgaaagggaagccgcatttcgcggacttcaacctg
gtgccgtccgattggggagggagtgtgggcccatggatagaggccatggcagaggcctac
ccctgtctggaggagctgaggctgaaacggatggtcgtgacggacgataacttggaattg
ctttctcgcgccttcaagaattttagggttctggttttggtctcctgcgagggtttcacc
accaacggtcttgccgctgtcgccgccaattgcaggaacctgagggagctcgatctacaa
gagaatgatgtggatgattcgagcggacactggctcagtcaattccccgagtcatgcaca
tcgctggtgtccctcaacattgcctgcctggaaggggaggtgaacttctccgttctggag
cgcctggtggcaaggtgccccaatctcaagaccctcaggctcaaccacgctgtgcccctc
gacaagctggccaacgtccttcgacaggcgccgcagctggtcgatttgggcactggtgcc
ttctctgcagaacctcgaccggagctctacttgaagctggcaagtgccttcgagggatgc
aagcagctaaagagcctgtctgggttctggtcggtggtccccacttatcttccggccatc
tattctatctgtgcagggatcacatcgttgaatttgagctatgcctctgtacaaggccct
gatctcatcaagcttgttagtcagtgccgaagtctacagcgcttatgggtgctggattac
atcgaagacaacggcttagatgttgtggctgcatcgtgcaaggacttgcgggagctccga
gttttcccatcagatccatacggtggtgccgggcagccagtctcacttacagagcagggc
cttgttgctgtctctgctggctgccctgtgctcaactctgtcctctacttctgccgccag
atgtccaatgccgcccttctcactgttgctcgcaaccgccccaacctgacccgtttccgg
ctctgcatcattgagccccagatgcccgactatctcacccaacagccactcgacattggc
tttggtgccattgtcaagtcctgcaaggacctccggcgcctctccatgtctggcctcctc
actgatcgcgtatttgagtacattggggtccatgccaagcaactcgagatgctatcagtg
gcgtttgctggggagagcgacctgggcctccaccacgtgctgtctgggtgcaagagcctc
cggaagctggagattagggactgcccctttggtgacaaggccctcatagccaacgctgcg
aagtttgagacaatgcgatccctttggatgtcatcatgctctgtgagctttggggcatgc
aagctgttggcggaaaagatgccccgtctcaatgtcgaggtcatcgatgagagcggacag
cccgactcacagcctgagagctgccccgttgagaagatctacgtctacaggacaattgca
gggcccaggtcggacatgccggactttgttcggaccatgtag
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