Magnolia sinica: 131224793
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Entry
131224793 CDS
T09699
Name
(RefSeq) RNA-binding protein BRN1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
msin
Magnolia sinica
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msin03041
]
131224793
Spliceosome [BR:
msin03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
131224793
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
BRAP2
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
131224793
NCBI-ProteinID:
XP_058076164
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All DBs
Position
14:29981553..30026164
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AA seq
442 aa
AA seq
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MAEGQNPLASSSDNAGSGESVKLFVGQVPKHMTESQLLAMFKEVALVEEVNIIKDKATRT
SRGCCFLICPSRQEADKAVNACHNKRTLPGASSPLQVKYADGELERLEHKLFVGMLPKNV
TDAEVSALFSKYGNIKDLQILRGSQQTSKGCAFLKYETKDQALAALEAINGKYKMEGSSV
PLVVKWADTEKERQARRAQKAQSQASNVTNTDSSQQSSLFGALPMGYMAPYNGFGYQAPG
TYGLMQYPLTSMQNQPGFHNMIPPVNQGNALRGITPDLTPTMAPRNFSTVQSNYLGSAYP
AVPGLQYPVAYPGSMMNHRPLVGSHGLTQLAMANSSLATSSSISTSSGAQMEGPPGANLF
IYHIPQEFGDVELSNAFQAFGRVLSAKVFVDKATGVSKCFGFVSYDSPASAQAAINMMNG
CQLGGKKLKVQLKRDNKQSKPY
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaggtcaaaatcccttggcgtcaagcagcgacaacgccggcagcggcgagagc
gtgaagctgttcgtaggccaggtgccgaagcacatgacggagtctcagctcctcgcgatg
ttcaaggaagtcgctcttgtcgaggaagtcaacatcatcaaagacaaggccaccagaact
tccagaggatgctgctttttgatttgcccgtcgaggcaggaagcagataaggcagtcaat
gcatgccataataagcggacgcttccaggggcttctagtccgttgcaagtcaagtatgca
gatggcgagttggaaagactagaacacaagctttttgttggtatgcttccaaagaatgtt
actgatgctgaagtttctgctttattttcaaaatatggaaatatcaaagatttacaaatt
ctaagaggttctcaacaaacaagcaaaggttgtgcttttttgaagtatgagacaaaagat
caagctcttgcagccctggaggcaatcaatgggaagtacaagatggagggttcaagtgtt
cctttagttgttaagtgggcagatacagaaaaagaaaggcaagctcgaagagctcagaaa
gctcagtctcaagcttctaatgtgacaaacactgattcatcacagcagtcgtcattattt
ggagctctgccaatgggatacatggctccatataatgggtttggttatcaggcacctggc
acttatggacttatgcagtatcccttaacttcaatgcaaaatcaacctggattccacaat
atgattccacctgttaatcagggaaatgcattgcgtggaatcacacctgatcttacccca
actatggcacccagaaatttcagtacagtgcaatccaactatttaggttcggcatatcct
gctgtgcctggtcttcagtatcctgtggcctaccctggtagcatgatgaaccacaggcct
ttggttggttcccatggtttgacccaacttgcaatggcaaatagtagcttggcaacatct
tcaagcatcagtacaagttctggggctcagatggaaggtcctcccggagctaatctattt
atctatcatatacctcaagaatttggtgatgtggagctttcgaatgcttttcaggcattt
ggtagggtattaagtgctaaggtctttgtcgacaaagccactggtgtcagcaaatgcttt
ggttttgtcagctatgactcacctgcatctgcccaagctgctatcaatatgatgaatggg
tgtcaattaggtggcaagaagttgaaggtacaacttaagagagacaacaaacagagtaaa
ccttattga
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