Magnolia sinica: 131224867
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Entry
131224867 CDS
T09699
Name
(RefSeq) probable U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
msin
Magnolia sinica
Pathway
msin03018
RNA degradation
msin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131224867
09123 Folding, sorting and degradation
03018 RNA degradation
131224867
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msin03019
]
131224867
03041 Spliceosome [BR:
msin03041
]
131224867
Messenger RNA biogenesis [BR:
msin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
131224867
mRNA degradation factors
5'-3' decay
Lsm complex
131224867
Spliceosome [BR:
msin03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
131224867
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
131224867
NCBI-ProteinID:
XP_058076283
LinkDB
All DBs
Position
14:complement(15989516..15999109)
Genome browser
AA seq
151 aa
AA seq
DB search
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
IRGNTIKYLRVPDEVIDKVQEETNKSRSDRRPPGVGRGRGRGREEAGSGRPAKGIGRGQD
DGGRGIGGSRGRGGPSGKGSGSSRGGGRGRG
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
atgcttcccctttcactgttgaagacagcgcaagggcatcccatgttagtggagctgaag
aatggggagacttataatggtcacttggtgaattgtgatacctggatgaacattcatctc
cgtgaagttatctgtacttcaaaggatggagacaggttttggcgaatgcctgaatgctat
attcgtggaaatacaataaagtatcttcgagttcctgatgaggttattgacaaagttcag
gaagaaaccaacaagagccgctcagacagaaggccccctggtgtgggccgtggaagggga
agaggtagagaggaggctggcagtggcaggcctgctaaaggcatcgggcgtggacaagat
gatggtggtagaggaattggaggcagccgtggcaggggtggacctagcggtaaaggcagc
ggaagcagcagaggtggagggcgtgggcgtggatga
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