Magnolia sinica: 131225001
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Entry
131225001 CDS
T09699
Name
(RefSeq) putative pectate lyase 21
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
msin
Magnolia sinica
Pathway
msin00040
Pentose and glucuronate interconversions
msin01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
131225001
Enzymes [BR:
msin01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
131225001
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
131225001
NCBI-ProteinID:
XP_058076413
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Position
14:69045714..69048251
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AA seq
337 aa
AA seq
DB search
MNCFVDGTRCQFSPCALGNRLPLCAIGFAAGTTGGAGGPYYMVSQSDDDPNDPVPGTLRY
AVDFAGRNKGGAWIIFKRSMMIKLKEKLWISSNTTIDGRGVNVTIVGKGLVLARVSNVIL
HNFEVVSTGQSDTVHVFDGSHHVWIDHLSSHDGNLGLVTVLQGSTDVTVSNCYLSNHNFN
MLLGASDEDTMDHILRVTVYRNWFDSSNQRMPHCRWGYCHVVNNYYRDWKYYAIGGRVHA
KVLSELNVFEPGRRLEVTPWFNRFTSDLTPTIVSSKDLMLKGATFHQFLKFGTLNTPHSE
FPSYVLPVRPTGSLIGLVINCGGVMWGAKLNRCMATT
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgaactgctttgtagatggcaccaggtgccagttttcaccatgtgcacttggcaaccga
ctccctctctgcgccattggcttcgctgcagggaccacaggcggtgcgggcgggccatac
tacatggtcagccaatcagacgatgacccaaatgacccagtcccaggaactctccgttac
gctgttgatttcgcggggagaaacaaaggaggggcttggatcatcttcaaaaggagcatg
atgattaagctcaaggaaaaactatggattagttctaatacaacaatagatgggaggggt
gtgaatgtaaccattgtcgggaaaggccttgttcttgcaagggtgagcaatgtgatcttg
cacaactttgaggtggtgtccaccgggcaaagcgataccgtccatgtgtttgatgggtca
caccatgtctggatcgaccacctgagctcgcatgatggaaatttggggctggtcacggtc
cttcaaggatcgacggacgtgaccgtctctaattgctatctttccaatcacaacttcaac
atgttgttgggtgcatcggatgaggataccatggatcacatactaagagtaacggtttat
cggaattggttcgattcatctaaccaaaggatgccgcattgcaggtggggatactgccat
gtagtgaacaactactacagggattggaaatactatgcaataggagggagggtgcacgcc
aaggttctttcggagctaaatgtgttcgagccaggccggcggttagaggtgacgccatgg
ttcaaccgcttcacctccgacctgaccccgacgattgtgtcatccaaggaccttatgttg
aagggcgcgacgtttcatcaattcctcaagtttggcacacttaacactccacacagcgaa
ttcccatcatacgttctcccagtgcggcccaccgggtcgctgatcggtctagtgattaac
tgtggtggggtcatgtggggagccaaactgaaccgttgcatggctactacatga
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