Magnolia sinica: 131225227
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Entry
131225227 CDS
T09699
Name
(RefSeq) chromatin structure-remodeling complex protein BSH isoform X1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
msin
Magnolia sinica
Pathway
msin03082
ATP-dependent chromatin remodeling
msin03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
131225227
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
131225227
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
msin01009
]
131225227
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msin03021
]
131225227
03036 Chromosome and associated proteins [BR:
msin03036
]
131225227
Protein phosphatases and associated proteins [BR:
msin01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
131225227
Transcription machinery [BR:
msin03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
131225227
SWI/SNF complex
131225227
Chromosome and associated proteins [BR:
msin03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
131225227
PBAF complex
131225227
SWI/SNF complex
131225227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
Motif
Other DBs
NCBI-GeneID:
131225227
NCBI-ProteinID:
XP_058076691
LinkDB
All DBs
Position
14:1540693..1552240
Genome browser
AA seq
259 aa
AA seq
DB search
MKPLPPSAYKQPIKFRIPTAENLVPIRVDVEVDGQHFKDAFTWNPSDPDSEALMFARRTV
KDLKLPQAFVTPIAQSIQTQVSEFRSYEGQEMHTGEKLVPIKLDLRVNRTVVRDQFLWDL
NNFESDPEEFARTFCSDLEIRDPEVGPAIAVAIREQLYEIAIQSVASARETRVSKKGRRG
VEHVTVSKSGGTALDLMKLFGSKASVVRKRKEWDVYEPIVDILSPEEVEVLDAREERNAR
LKKKLDDKDDGYLTRFTRS
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctctcccgccctctgcttataaacagcccatcaaattcagaatcccaactgct
gaaaatttagttcctatccgtgtggatgtggaagttgatggacaacatttcaaagatgca
tttacatggaacccttctgatcctgattctgaagcactgatgtttgcaagaaggacggtg
aaagatttgaaactccctcaggcattcgtaactcccattgctcaatctattcagacacag
gtgagcgagtttcgatcatatgaaggacaggagatgcatactggggagaagcttgtgcct
atcaagcttgatcttcgggttaataggactgtcgtaagggatcagtttttgtgggacttg
aacaatttcgagagtgatcctgaagagtttgcgaggaccttttgcagtgatcttgaaatc
agagaccctgaagttggacctgcaattgcagttgcaatcagggagcagctttatgagata
gccatccaaagcgtcgcctcagcaagggaaaccagggtaagcaaaaagggtcgccgaggg
gtagaacatgttacagttagtaaatcaggagggactgccttggacttgatgaagttattc
ggtagcaaggcaagtgttgtccgtaaaaggaaggagtgggacgtttatgagcccattgtt
gatattctttcgcctgaggaagtggaggttcttgatgcaagagaagagcgaaatgctcgg
ctgaagaaaaagcttgatgacaaagatgatgggtatttgacacgcttcacacgcagctga
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