Magnolia sinica: 131225302
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Entry
131225302 CDS
T09699
Name
(RefSeq) pleiotropic drug resistance protein 3-like isoform X1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
msin
Magnolia sinica
Pathway
msin02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
131225302
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
msin02000
]
131225302
Transporters [BR:
msin02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
131225302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
AAA_18
RsgA_GTPase
AAA_25
AAA
AAA_22
AAA_16
AAA_29
AAA_28
ABC2_membrane_3
AAA_33
AAA_30
PduV-EutP
nSTAND3
TsaE
AAA_14
ABC_trans_N
Rad17
RuvB_N
NACHT
AAA_19
SMC_N
AAA_17
Viral_helicase1
NPHP3_N
Ploopntkinase3
T2SSE
AAA_5
NTPase_1
DUF3135
Gp_dh_C
Motif
Other DBs
NCBI-GeneID:
131225302
NCBI-ProteinID:
XP_058076793
LinkDB
All DBs
Position
14:3005660..3054216
Genome browser
AA seq
1431 aa
AA seq
DB search
MSHFEGRDELILESVSLIDRHRSLNSSSENSTRENDADEVELQWAAIERLPTFERLRFSL
SNNQRTRMVDVTKLGALERHELIEKLIKHIENDNRQLLQKLKERIDRVNVRVPTVEVRCK
NLCVEAECEVVEGKPLPTLWNSAKSTFSVFGRLSCTKSQEAKISIIKDVSGIIKPSRMIL
LLGTPGCGKTTLLLALAGKLNQSLKATGEITYNDYELGEFVPQKTSAYISQHDLHIPEMT
VRETLDFSARCQGVGSRAEIMMDVIRREKQEAIVPEPDIDTYMKATSIEGLEKTLQTDYI
LKILGLDICADTMVGDAMRRGISGGQKKRLTTGEMIVGPMRALFMDGISNGLDSSTTFQI
ISCLQQLVHITEATALISLLQPAPETYDLFDDIILIADGKIVYHGPRSDVLKYFEDCGFR
CPERKGVADFLQEVISKKDQAQYWYHIDKPYGFISVDQFSEKFRESCIGQKLDEELSKPY
DMTQYHKSALSFSVYSLPKWELFKACMTRELLLMKRNAFVYIFNSTRLLIIALVTMTVFL
RTQMHIDLVHANYRMGSLFYALMILMLDGIPELSMTVSRLAVFYKQRDFYFYPAWAYAIP
ASILKIPVSLVQSLVWTVLTYYVIGYSPEAGRFFCHFLLLFALHQMSMSMFRFTASIFQT
MSAALMGGNLFLLFFLLFGGYILPRSSIPSWLHWGFWLSPLTYGEIGMSVNEFLAPRWQK
DSFANTTIGNQVLISRGLNFGGYFYWISLGALVGFSILFNIGFTLALTFLQSPGISRAII
SHEKLSQLHEREDHRSSTHLGRSSTSSLPPETVKAPKRVGRMVLPFVPLTMAFQDVWYCI
DTPLEMRERGFPHRKLRLLHDITGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTAGTIKG
DIRIGGYPKVQETFARISGYCEQTDIHSPQITIKESVIYSAWLRLPCQIDSSTKAEFVAQ
VLEMIELDGIKDNLVGIPGVSGLSTEQRKRLTIAVELVSNPSIIFMDEPTSGLDARAAAI
VMRAVKNIGDTGRTVVCTIHQPSIDIFESFDELILMKRGGEITYAGPLGPHSSTVIEYFE
GISGVRKIKDNYNPATWMLEVTATAIETQLGVDFAHIYRASSLYKDNKELVMQLSSPPSG
STDLHFPTRYSENSWGQFKACLWKQSLSYWRSPAYNLIRLMFTISASTLFGLLFWQHGKK
IDDQQDLLNMLGAMFSAMFFVGLSNCSLVLPFIGTERTVLYRERFAGMYSSWAYSFAQVA
IEIPYVFVQALVLVSITYPAIGYYWSASKILWYFYAIFCTLLYFSYLGMLIMALSPNVQV
ASILASSGYTMLNLFSGFLIPGPQFPKWWYWCYWISPTSWSLKCLFTSQYGDISKEITAF
DEIKAVDSFLESYLGFYHDSLGIMAIVLAALPVAFAFLFAHRIAKLNFQRR
NT seq
4296 nt
NT seq
+upstream
nt +downstream
nt
atgtcacatttcgaaggtagagatgagctgatactcgagtctgtttcattgattgatcgc
caccgttctctgaatagttcgagtgagaattctacgagagagaatgacgcggacgaagtc
gaattacaatgggcggcgatcgagagattgcccaccttcgaacggttgagattttctctg
tccaacaatcaacgaacgagaatggtcgatgttacgaagcttggggcacttgaaaggcat
gagttgatagagaagcttatcaagcacatagagaacgataatcgccagttattgcagaaa
ctgaaagaaagaatagatagagttaatgtgagagtgcctactgtggaggtgagatgcaag
aacctatgtgtggaagcagagtgtgaagttgttgaagggaagcccctccctactctatgg
aactctgccaagagcaccttctctgtttttggaaggctctcatgtacaaagtctcaagaa
gccaagataagcatcatcaaggatgtcagtggcattatcaagccgtcaaggatgattcta
ttgcttggcacaccagggtgtgggaaaaccacattattattggcacttgccgggaaactg
aaccagtctctcaaggccacaggagaaatcacgtacaacgattatgaacttggcgaattt
gttccacagaaaacatcagcttacataagccaacatgatctccacattcctgagatgact
gtgagggaaacgctcgacttctcggcacgttgtcagggtgttggaagcagagcagaaatt
atgatggatgtcattagacgagagaagcaagaagcaattgtccctgaaccagacattgac
acatacatgaaggccacttctatagaaggattggaaaaaacccttcaaacagactacatt
ttgaagatccttggattggatatctgcgccgacacaatggttggtgatgccatgagaaga
ggcatttcgggtggtcagaagaaaagactcactactggtgagatgattgtcggaccaatg
agggctcttttcatggatggaatatcgaatggcttggatagttccactacctttcagatc
atttcctgtcttcagcaacttgtgcatataacagaagcaactgcactgatttcacttctt
cagcctgcacctgagacatatgatctgttcgatgatatcatcttgattgcagatggaaag
atcgtataccatggtccccgaagtgatgttcttaagtattttgaagattgcgggttccgg
tgcccagagagaaaaggggtagctgactttcttcaggaggttatatccaagaaggatcaa
gcacagtactggtaccatattgacaaaccttatggtttcatttctgtcgatcaattctct
gagaaattcagggaatcttgtatcggacagaagctagatgaggagctttcgaagccatat
gatatgacccagtatcacaaaagcgctttgtccttcagcgtctattcactgcctaaatgg
gaactatttaaagcttgcatgacgagagaactgctactcatgaagcggaacgcatttgtt
tacatattcaactcaactcggcttctgatcattgcattagtcacaatgacggttttcctg
cgtacccagatgcacatagatctggtccatgcgaattacagaatgggttctctgttttac
gcacttatgatacttatgcttgatggaatcccagagctgtccatgacagtttccagactc
gctgtcttctacaaacaaagagacttttacttctatccggcctgggcatatgctatccca
gcttctattctaaagattccagtttcattggtgcaatccttggtttggacagttcttact
tactatgttattgggtacagtcctgaggccggaaggtttttctgccatttccttctactt
ttcgctctgcatcaaatgtcaatgtccatgttccgctttactgcatctattttccaaact
atgtccgctgctttgatgggtggaaatttattcttgttatttttcctattattcggaggc
tacattcttccacgatcctctataccgagttggttgcattggggattctggctttctcca
ttgacgtacggtgagataggcatgtccgtaaatgagttccttgcccctagatggcaaaag
gattcatttgcaaacacaactatagggaatcaagtattgataagccgtggactgaacttt
gggggctacttttattggatatcacttggcgcgttggttggatttagcatacttttcaac
attggatttaccttggccttgactttcttacaatctcctgggatatctcgtgcaattatt
tctcatgaaaagctctctcaactacatgaaagagaagaccataggagcagtacccattta
ggaagaagttccacttcttctcttcctccagaaactgttaaagcgccaaaaagagttggg
aggatggtcttaccctttgtgcccctaacgatggcatttcaagatgtctggtattgtatt
gatacgcctctggaaatgagagaacgaggctttccgcacaggaaactccggcttcttcat
gatattacgggtgcattcaggcctggtgttcttacagcactaatgggtgttagtggagca
gggaaaacaactctgatggatgttctttctggaagaaaaacagctggtacgatcaaaggg
gacataagaattggagggtatcctaaagtccaagaaacatttgctaggatatcaggttat
tgtgagcagacagacatacactccccacaaatcaccatcaaagaatcggtgatttactca
gcttggctgcgactaccatgtcagatcgactcaagcactaaagctgagtttgttgctcaa
gtccttgaaatgattgagcttgatggaataaaagataacttagtaggaattcctggagta
agcggtctatccaccgagcagcgtaaacggctgacgatcgcagtggagcttgtttcaaac
ccatctattatattcatggatgaacccacatcaggtctagatgcaagagcagcagcaata
gtcatgcgtgcggtgaagaacatcggtgatacagggaggacagtggtttgcaccattcac
cagcctagtatagatatatttgagtcatttgatgagttgattctaatgaaaaggggaggg
gaaataacctatgccggaccattgggtccgcattcaagtacagttattgaatattttgag
ggaatttctggtgtacgaaaaatcaaagacaattacaacccggcaacatggatgttagaa
gttaccgctacagccatagaaacacaacttggtgtagattttgctcatatttatagagca
tcatctctgtataaagacaacaaagagctggttatgcagttgagttcaccaccttcaggt
tcaacagatttgcattttcctactcgttattcggagaacagttggggacagttcaaagct
tgcctatggaaacaaagcttgtcttattggagaagtcctgcatacaacctaatacgctta
atgttcacaatcagcgcatctacattgttcggactgctgttttggcagcatgggaagaaa
atagatgaccagcaggacttactcaacatgcttggagcaatgttctctgccatgttcttc
gtcgggttaagcaactgctcgttagttctaccattcattggcaccgagcgaacagtttta
taccgagaaaggtttgccgggatgtactcttcatgggcctattcatttgcgcaggtggcc
attgaaattccttacgtgttcgtccaagcacttgtgttggtgtccatcacctacccggcg
attgggtactattggtcagcttctaagatcctttggtacttctacgccatcttctgcacg
cttctctacttcagctacctcggaatgttgattatggcactgagcccgaacgttcaggtg
gcttccatattggcgtcttccggctacaccatgctgaatctgttctcgggctttctgata
cccggaccgcaatttccaaagtggtggtattggtgctattggattagtcccacatcatgg
agcttaaaatgcctcttcacttcacaatacggcgacataagcaaggagatcacagcattc
gacgaaatcaaagctgttgattccttcttagaaagttacttgggtttttaccacgatagt
ttaggcatcatggccattgttcttgctgctttgcctgtcgccttcgcttttcttttcgct
catcgtatagcaaaattgaatttccaaaggaggtga
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