Magnolia sinica: 131225484
Help
Entry
131225484 CDS
T09699
Name
(RefSeq) AMSH-like ubiquitin thioesterase 3 isoform X1
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
msin
Magnolia sinica
Pathway
msin04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
msin00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
131225484
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
msin01002
]
131225484
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msin04131
]
131225484
04121 Ubiquitin system [BR:
msin04121
]
131225484
Enzymes [BR:
msin01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
131225484
Peptidases and inhibitors [BR:
msin01002
]
Metallo peptidases
Family M67
131225484
Membrane trafficking [BR:
msin04131
]
Endosome - Lysosome transport
Others
Others
131225484
Ubiquitin system [BR:
msin04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
131225484
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
JAB
USP8_dimer
Prok-JAB
Motif
Other DBs
NCBI-GeneID:
131225484
NCBI-ProteinID:
XP_058076995
LinkDB
All DBs
Position
14:8659330..8694887
Genome browser
AA seq
505 aa
AA seq
DB search
MMPRAKTININASAQKVDVDNRIPLQFYYRIAENLLKQASIYREEKNLIDLYIILLRFSS
LMSETIPLHRDYQVLLPKEKICFRKKLVAAIEELESLKPDVQCRVNELNKGHVAELDERE
RISYNSAAALEWPPVNKQIPSNPEIKQPDPCSINKPNQFLSANPVLIDKQFRKLSLNVPH
PKEETLTRHSIFGPMGLWGQWPGPVTGIRVNYPSNADLTSTGISGQNQAGQYGLVEVKDD
DSGRDRSTTESPLSLDALLLPTKKSCPLPNDAKWEDTVLLNNIHQPSPPPVLAYVQNDLL
PISPSKVADPRPGPSRPSLDGIQDSNAYQHLYIPPKMMEDFLRMAQTNTAKNLETCGVLA
GSLKNRKFFVTTLIIPKQESTSDTCQTMNEEEIFDIQDKLSLFPLGWIHTHPSQSCFMSS
IDLHTHYSYQVMLPEAIAIVMAPTDTSRTHGIFHLSDPAGVTLIRNCQQRGFHPHEQPED
GSPIYEHCSHVYMHPNLNFDVVDLR
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgatgccgagggcgaagaccatcaacatcaatgcaagcgcccagaaagtcgacgtggac
aatcggatcccccttcaattctactaccggattgccgagaatcttctcaaacaggctagt
atatatcgggaggagaagaatctcatagacctgtatattatccttctcagattttcgagt
ttgatgtccgagactataccactccatcgagattaccaggttttgcttccaaaggaaaaa
atctgtttcaggaagaaactggtggccgctatagaagagttagagtctctgaagccggat
gtccaatgtcgagttaatgaactgaacaaaggtcatgtggctgagcttgatgagcgggaa
aggatttcatacaattcagctgctgctttagagtggccacctgttaataagcaaatccct
tcaaaccctgaaattaagcagccagatccctgttctatcaacaaacccaatcaattttta
tccgcaaatccagtgctgattgacaagcagtttcggaagctatctctcaatgtacctcat
ccaaaggaggagacgttgaccaggcattctatttttggcccaatgggactctggggtcag
tggccgggacctgttactggtataagggtcaattatcctagcaatgctgacttaacttca
actggaatttcaggccagaatcaggctggacaatatggtcttgtggaagtaaaagacgat
gattcaggaagggataggtctaccactgaatctcctctctctctggatgcattgttgctt
cctactaagaagtcctgtcctctgcctaatgatgctaaatgggaagatactgtactgttg
aacaatatccatcagccttcgcctcctccagtgcttgcttatgtacagaatgacttactt
ccaatttctccatctaaagttgctgatccaagacctgggccttcaagaccttcattggat
gggattcaagattctaatgcttatcagcatttatacattccaccaaagatgatggaggat
ttcttgaggatggcacagacaaacaccgcaaaaaatctagaaacgtgtggagttcttgcg
ggttcacttaaaaacagaaagttctttgttacaacgctaataataccaaagcaggagtcg
acttcagatacatgccagacaatgaatgaagaagagatatttgatattcaagacaaactc
tcactttttcctcttggttggattcatacgcacccatcacagtcttgcttcatgtcctca
attgatcttcacactcattactcatatcaggtcatgttgccagaagcaatagcaattgtt
atggcacccacggacacatccaggacccatggcatattccatctctctgacccggctggc
gtcaccttgatacgtaattgtcaacagcgcggttttcatcctcacgaacaacctgaggat
ggcagcccgatctatgaacactgttctcatgtgtacatgcaccccaatttgaactttgat
gtagtcgatcttcggtaa
DBGET
integrated database retrieval system
